RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 NRAPQ86VF7 1730 aa0.41□□□□□ -2.34
GTF3C3-203ENST00000416690 DOT1LQ8TEK3 1739 aa0.41□□□□□ -2.34
GTF3C3-203ENST00000416690 NRXN2Q9P2S2 1712 aa0.41□□□□□ -2.34
GTF3C3-203ENST00000416690 ZCCHC6Q5VYS8 1495 aaKnown RBP0.41□□□□□ -2.34
GTF3C3-203ENST00000416690 APC2O95996 2303 aa0.41□□□□□ -2.34
GTF3C3-203ENST00000416690 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.41□□□□□ -2.345e-70■■■■■ 130.3
GTF3C3-203ENST00000416690 ARHGAP32A7KAX9 2087 aa0.41□□□□□ -2.34
GTF3C3-203ENST00000416690 LTBP2Q14767 1821 aa0.41□□□□□ -2.34
GTF3C3-203ENST00000416690 SPTA1P02549 2419 aa0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 MED1Q15648 1581 aaPredicted RBP0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 TTC37Q6PGP7 1564 aa0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 DNMBPQ6XZF7 1577 aa0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 UBR4Q5T4S7 5183 aa0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 ABCA4P78363 2273 aa0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 C5P01031 1676 aa0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 ZDBF2Q9HCK1 2354 aa0.4□□□□□ -2.34
GTF3C3-203ENST00000416690 MED12LQ86YW9 2145 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 PLXNA3P51805 1871 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 SORL1Q92673 2214 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 KIAA0556O60303 1618 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CAMSAP1Q5T5Y3 1602 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 ABCA9Q8IUA7 1624 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 TRBC2A0A5B9 178 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 MACROD2A1Z1Q3 448 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 ADAM20O43506 726 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 TYROBPO43914 113 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 PSMD10O75832 226 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 BEST1O76090 585 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 PGK1P00558 417 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 SEMG1P04279 462 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 RETP07949 1114 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 WNT2P09544 360 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 H2AFZP0C0S5 128 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 PORP16435 677 aaPredicted RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 RCC1P18754 421 aaPredicted RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 HTR1EP28566 365 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 GJB2P29033 226 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 RPS9P46781 194 aaKnown RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 OR3A1P47881 315 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 POU3F4P49335 361 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CCR4P51679 360 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 NAGLUP54802 743 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CRY2Q49AN0 593 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 OR2B11Q5JQS5 317 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 DCST2Q5T1A1 773 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 DCLRE1AQ6PJP8 1040 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 MFSD7Q6UXD7 560 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 RBPMS2Q6ZRY4 209 aaKnown RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 STOX1Q6ZVD7 989 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 ZNF100Q8IYN0 542 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 SMYD1Q8NB12 490 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 C20orf203Q8NBC4 194 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 GOLGA5Q8TBA6 731 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 SAP25Q8TEE9 199 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 RAD54LQ92698 747 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 EVI5LQ96CN4 794 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 C17orf62Q9BQA9 187 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 FAM173AQ9BQD7 235 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CXXC4Q9H2H0 198 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 FAM212BQ9NTI7 297 aaPredicted RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 DNAJC11Q9NVH1 559 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 MARCH5Q9NX47 278 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 OPN4Q9UHM6 478 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 VPS28Q9UK41 221 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 PCDHGB4Q9UN71 923 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 TMEM5Q9Y2B1 443 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 RFNGQ9Y644 331 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 SLCO1B1Q9Y6L6 691 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 COL5A3P25940 1745 aaPredicted RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 PKDREJQ9NTG1 2253 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 ARAP1Q96P48 1450 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 MRC2Q9UBG0 1479 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CEP164Q9UPV0 1460 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CNOT1A5YKK6 2376 aaKnown RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 SPTBN1Q01082 2364 aaKnown RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 ABCA8O94911 1581 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 PCF11O94913 1555 aaKnown RBP0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CR1P17927 2039 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 IQGAP2Q13576 1575 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CEP170Q5SW79 1584 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 TNCP24821 2201 aa0.4□□□□□ -2.35
GTF3C3-203ENST00000416690 CACNA1BQ00975 2339 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 SPG11Q96JI7 2443 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 ANKHD1Q8IWZ3 2542 aaKnown RBP0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 NCOR2Q9Y618 2525 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 MAPKBP1O60336 1514 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 SHANK1Q9Y566 2161 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 COL6A6A6NMZ7 2263 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 URB1O60287 2271 aaKnown RBP0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 ABCA1O95477 2261 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 DNMT1P26358 1616 aaKnown RBP0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 HECW1Q76N89 1606 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 IQGAP3Q86VI3 1631 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 LTBP4Q8N2S1 1624 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 PHRF1Q9P1Y6 1649 aaKnown RBP0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 EIF2AK4Q9P2K8 1649 aaKnown RBP0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 FAM186AA6NE01 2351 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 WNK1Q9H4A3 2382 aa0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 GTPBP10A4D1E9 387 aaKnown RBP0.39□□□□□ -2.35
GTF3C3-203ENST00000416690 NKX2-6A6NCS4 301 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms