RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CCNJQ5T5M9 372 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 PODNL1Q6PEZ8 512 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 ZNF619Q8N2I2 560 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 OR51Q1Q8NH59 317 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 PIK3R3Q92569 461 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 UBE2FQ969M7 185 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 DGAT2Q96PD7 388 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 NLGN3Q9NZ94 848 aa17.67■□□□□ 0.42
USP39-202ENST00000409025 GPR55Q9Y2T6 319 aaPredicted RBP17.67■□□□□ 0.42
USP39-202ENST00000409025 MN1Q10571 1320 aaPredicted RBP17.67■□□□□ 0.42
USP39-202ENST00000409025 TMEM150CB9EJG8 249 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 MYF5P13349 255 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 TDGF1P13385 188 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CD1CP29017 333 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 IFNA8P32881 189 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 MAP3K8P41279 467 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CRISP1P54107 249 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 HSD17B7P56937 341 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CSNK2BP67870 215 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 POU6F2P78424 691 aaPredicted RBP17.66■□□□□ 0.42
USP39-202ENST00000409025 DUSP8Q13202 625 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 GPR68Q15743 365 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 GAB3Q8WWW8 586 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 FANCEQ9HB96 536 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CUTCQ9NTM9 273 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 PAK1IP1Q9NWT1 392 aaPredicted RBP17.66■□□□□ 0.42
USP39-202ENST00000409025 PILRBQ9UKJ0 227 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CHST2Q9Y4C5 530 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CACNA1IQ9P0X4 2223 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 TGFBR3LH3BV60 316 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 TPST2O60704 377 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 FAM20BO75063 409 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 THBS1P07996 1170 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 HTR1AP08908 422 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CCNYL3P0C7X3 344 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 EPHA8P29322 1005 aaPredicted RBP17.66■□□□□ 0.42
USP39-202ENST00000409025 CSF2RBP32927 897 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 GABRA3P34903 492 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 IDH2P48735 452 aaKnown RBP17.66■□□□□ 0.42
USP39-202ENST00000409025 RGS8P57771 180 aaPredicted RBP17.66■□□□□ 0.42
USP39-202ENST00000409025 BTG2P78543 158 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 PIGFQ07326 219 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 SIGLEC14Q08ET2 396 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 PTGES3Q15185 160 aaKnown RBP17.66■□□□□ 0.42
USP39-202ENST00000409025 EIPR1Q53HC9 387 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 LAIR1Q6GTX8 287 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 PGBD2Q6P3X8 592 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 B3GNT6Q6ZMB0 384 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 P3H2Q8IVL5 708 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CLIP4Q8N3C7 705 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 FKBP10Q96AY3 582 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 DUSP23Q9BVJ7 150 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 DGCR6LQ9BY27 220 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 SAP130Q9H0E3 1048 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 CTPS2Q9NRF8 586 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 ENAMQ9NRM1 1142 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 MAN2C1Q9NTJ4 1040 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 TMEM9Q9P0T7 183 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 SEMA5BQ9P283 1151 aa17.66■□□□□ 0.42
USP39-202ENST00000409025 AGAP5A6NIR3 686 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 AP3D1O14617 1153 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 FRS3O43559 492 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 WBP4O75554 376 aaKnown RBP17.65■□□□□ 0.42
USP39-202ENST00000409025 NKX2-2O95096 273 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 DBIP07108 87 aaKnown RBP17.65■□□□□ 0.42
USP39-202ENST00000409025 OSMP13725 252 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 S1PR1P21453 382 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 TARDBPQ13148 414 aaKnown RBP eCLIP17.65■□□□□ 0.42
USP39-202ENST00000409025 ZNHIT3Q15649 155 aaPredicted RBP17.65■□□□□ 0.42
USP39-202ENST00000409025 WDR74Q6RFH5 385 aaPredicted RBP17.65■□□□□ 0.42
USP39-202ENST00000409025 ZNF836Q6ZNA1 936 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 PRSS42Q7Z5A4 293 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 CLVS1Q8IUQ0 354 aaPredicted RBP17.65■□□□□ 0.42
USP39-202ENST00000409025 D2HGDHQ8N465 521 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 APH1BQ8WW43 257 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 HOXB13Q92826 284 aaPredicted RBP17.65■□□□□ 0.42
USP39-202ENST00000409025 PMM1Q92871 262 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 CCDC90BQ9GZT6 254 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 DUSP21Q9H596 190 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 IMPAD1Q9NX62 359 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 PTTG2Q9NZH5 202 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 FTSJ1Q9UET6 329 aa17.65■□□□□ 0.42
USP39-202ENST00000409025 TMEM184BQ9Y519 407 aaPredicted RBP17.65■□□□□ 0.42
USP39-202ENST00000409025 ZNF749O43361 778 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 CHMP24386 653 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 KRT20P35900 424 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 STT3AP46977 705 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 CDC42P60953 191 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 SLC35A2P78381 396 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 SMN1Q16637 294 aaKnown RBP17.64■□□□□ 0.42
USP39-202ENST00000409025 XAF1Q6GPH4 301 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 TTLL10Q6ZVT0 673 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 KMT5CQ86Y97 462 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 GATAD2AQ86YP4 633 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 ZNF540Q8NDQ6 660 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 OR4K5Q8NGD3 323 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 RHOXF1Q8NHV9 184 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 SLC38A4Q969I6 547 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 CCDC74AQ96AQ1 378 aa17.64■□□□□ 0.42
USP39-202ENST00000409025 SLC41A2Q96JW4 573 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms