RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CEP70Q8NHQ1 597 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 SARAFQ96BY9 339 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 GNRHR2Q96P88 292 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 ADOQ96SZ5 270 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 PRPF18Q99633 342 aaKnown RBP10.83□□□□□ -0.68
RFC4-202ENST00000392481 OSBPL11Q9BXB4 747 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 UBQLN3Q9H347 655 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 EXO5Q9H790 373 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 ATAD3AQ9NVI7 634 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 ASIC5Q9NY37 505 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 NKIRAS1Q9NYS0 192 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 NOP53Q9NZM5 478 aaKnown RBP10.83□□□□□ -0.68
RFC4-202ENST00000392481 KLRF1Q9NZS2 232 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 C15orf41Q9Y2V0 281 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 PKDREJQ9NTG1 2253 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 ADGRG4Q8IZF6 3080 aa10.83□□□□□ -0.68
RFC4-202ENST00000392481 HPNP05981 417 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 LAMP1P11279 417 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 PTGDSP41222 190 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 CDK9P50750 372 aaKnown RBP10.82□□□□□ -0.68
RFC4-202ENST00000392481 C21orf58P58505 322 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 GAB1Q13480 694 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 VPS26BQ4G0F5 336 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 CPTPQ5TA50 214 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 HIST2H2BCQ6DN03 193 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 TMEM211Q6ICI0 200 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 ANGPTL8Q6UXH0 198 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 RIMKLAQ8IXN7 391 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 NATD1Q8N6N6 113 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 OR4N2Q8NGD1 307 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 OR1J4Q8NGS1 313 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 NEIL3Q8TAT5 605 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 RAB3IL1Q8TBN0 382 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 RNF138Q8WVD3 245 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 HOXB13Q92826 284 aaPredicted RBP10.82□□□□□ -0.68
RFC4-202ENST00000392481 COQ8BQ96D53 544 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 LMF2Q9BU23 707 aaKnown RBP10.82□□□□□ -0.68
RFC4-202ENST00000392481 SLC6A15Q9H2J7 730 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 AKTIPQ9H8T0 292 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 C3orf14Q9HBI5 128 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 GALNT9Q9HCQ5 603 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 Q9N2J8 555 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 PNPLA3Q9NST1 481 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 MRTO4Q9UKD2 239 aaKnown RBP10.82□□□□□ -0.68
RFC4-202ENST00000392481 ACAD8Q9UKU7 415 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 CBLCQ9ULV8 474 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 MAPRE3Q9UPY8 281 aa10.82□□□□□ -0.68
RFC4-202ENST00000392481 KLF2Q9Y5W3 355 aaPredicted RBP10.82□□□□□ -0.68
RFC4-202ENST00000392481 PHF3Q92576 2039 aaKnown RBP10.82□□□□□ -0.68
RFC4-202ENST00000392481 MED12Q93074 2177 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 FIGNL2A6NMB9 653 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 GNB5O14775 395 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 SNPHO15079 494 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 EMC8O43402 210 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 TRAPPC6AO75865 159 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 HOXD4P09016 255 aaPredicted RBP10.81□□□□□ -0.68
RFC4-202ENST00000392481 G6PDP11413 515 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 ENDOUP21128 410 aaKnown RBP10.81□□□□□ -0.68
RFC4-202ENST00000392481 ACVR2AP27037 513 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 PTPN6P29350 595 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 GABRA3P34903 492 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 MAP3K8P41279 467 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 TRPC1P48995 793 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 CLDN8P56748 225 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 DECR1Q16698 335 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 WLSQ5T9L3 541 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 AGBL2Q5U5Z8 902 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 TRIM42Q8IWZ5 723 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 LRRC34Q8IZ02 419 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 KRTCAP2Q8N6L1 136 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 CDRT4Q8N9R6 151 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 OR5M9Q8NGP3 310 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 MGARPQ8TDB4 240 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 OR5P2Q8WZ92 322 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 EFHD2Q96C19 240 aaPredicted RBP10.81□□□□□ -0.68
RFC4-202ENST00000392481 PPP1R36Q96LQ0 422 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 EQTNQ9NQ60 294 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 PNPOQ9NVS9 261 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 THAP1Q9NVV9 213 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 SPRR3Q9UBC9 169 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 PCDHGB3Q9Y5G1 929 aa10.81□□□□□ -0.68
RFC4-202ENST00000392481 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 A0A1W2PRB8 838 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 WDR1O75083 606 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 SNNO75324 88 aaPredicted RBP10.8□□□□□ -0.68
RFC4-202ENST00000392481 CBR3O75828 277 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 NKX2-2O95096 273 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 IL33O95760 270 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 CYP4B1P13584 511 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 EFNA1P20827 205 aaPredicted RBP10.8□□□□□ -0.68
RFC4-202ENST00000392481 COL8A1P27658 744 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 PRKAG1P54619 331 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 PSMD4P55036 377 aaKnown RBP10.8□□□□□ -0.68
RFC4-202ENST00000392481 DIO3P55073 304 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 PRR5P85299 388 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 CACNA1DQ01668 2161 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 LSM12Q3MHD2 195 aaKnown RBP10.8□□□□□ -0.68
RFC4-202ENST00000392481 ATG16L1Q676U5 607 aa10.8□□□□□ -0.68
RFC4-202ENST00000392481 ZCCHC12Q6PEW1 402 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms