RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ZNF248Q8NDW4 579 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 FAM110BQ8TC76 370 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 TP53INP1Q96A56 240 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 SDF2Q99470 211 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 TREX2Q9BQ50 279 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-202ENST00000348495 DENND2DQ9H6A0 471 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-202ENST00000348495 RUBCNLQ9H714 662 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 ANGPT4Q9Y264 503 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 FREM2Q5SZK8 3169 aa25.04■■□□□ 1.6
SSBP4-202ENST00000348495 TMEM247A6NEH6 219 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 MASP2O00187 686 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 KCNK2O95069 426 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 PGM3O95394 542 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 ZIC2O95409 532 aaPredicted RBP25.03■■□□□ 1.6
SSBP4-202ENST00000348495 PIGAP37287 484 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 CRISP3P54108 245 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 CYP27C1Q4G0S4 372 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 HLA-DQA1Q5Y7H0 255 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 CCDC80Q76M96 950 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 OR52E4Q8NGH9 312 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 KCNE4Q8WWG9 221 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 C5orf58C9J3I9 102 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 H6PDO95479 791 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 CRYBA2P53672 197 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 POLE2P56282 527 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 MRPS22P82650 360 aaKnown RBP25.03■■□□□ 1.6
SSBP4-202ENST00000348495 CCNJQ5T5M9 372 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 INTS11Q5TA45 600 aaKnown RBP25.03■■□□□ 1.6
SSBP4-202ENST00000348495 LRRC74BQ6ZQY2 392 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 OLIG3Q7RTU3 272 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 OR5L2Q8NGL0 311 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 RMND5BQ96G75 393 aaPredicted RBP25.03■■□□□ 1.6
SSBP4-202ENST00000348495 ZNF350Q9GZX5 532 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 SLC38A1Q9H2H9 487 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 CBLCQ9ULV8 474 aa25.03■■□□□ 1.6
SSBP4-202ENST00000348495 DSPPQ9NZW4 1301 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 CACNA1AO00555 2505 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 GUSBP08236 651 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 KDELR2P33947 212 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 ACTR3P61158 418 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 CRTC2Q53ET0 693 aaPredicted RBP25.02■■□□□ 1.6
SSBP4-202ENST00000348495 GPAT3Q53EU6 434 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 RPS26P11Q5JNZ5 115 aaPredicted RBP25.02■■□□□ 1.6
SSBP4-202ENST00000348495 CYP2R1Q6VVX0 501 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 NAF1Q96HR8 494 aaKnown RBP25.02■■□□□ 1.6
SSBP4-202ENST00000348495 DEFB126Q9BYW3 111 aa25.02■■□□□ 1.6
SSBP4-202ENST00000348495 ACOX3O15254 700 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 FCMRO60667 390 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 IGKV1D-16P01601 117 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 AQP1P29972 269 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 NR0B1P51843 470 aaKnown RBP25.01■■□□□ 1.59
SSBP4-202ENST00000348495 KPNB1Q14974 876 aaKnown RBP25.01■■□□□ 1.59
SSBP4-202ENST00000348495 BCORP1Q8N888 145 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 BHLHE22Q8NFJ8 381 aaPredicted RBP25.01■■□□□ 1.59
SSBP4-202ENST00000348495 HSPBAP1Q96EW2 488 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 LMF1Q96S06 567 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 DPH1Q9BZG8 443 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 SAP130Q9H0E3 1048 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 LIN28AQ9H9Z2 209 aaKnown RBP25.01■■□□□ 1.59
SSBP4-202ENST00000348495 WDR70Q9NW82 654 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 FBXO34Q9NWN3 711 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 CALML5Q9NZT1 146 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 SSUH2Q9Y2M2 353 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 OR10H1Q9Y4A9 318 aa25.01■■□□□ 1.59
SSBP4-202ENST00000348495 CDC14CA4D256 554 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 A8MUI8 341 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 GMNNO75496 209 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 SERPINA7P05543 415 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 PSPHP78330 225 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 CCNIQ14094 377 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 CRB2Q5IJ48 1285 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 DCAF10Q5QP82 559 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 TYW3Q6IPR3 259 aaKnown RBP25■■□□□ 1.59
SSBP4-202ENST00000348495 FIGNL1Q6PIW4 674 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 FRRS1Q6ZNA5 592 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 SPPL2CQ8IUH8 684 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 ARMC10Q8N2F6 343 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 BBS10Q8TAM1 723 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 GATA6Q92908 595 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 NSMCE2Q96MF7 247 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 MYOTQ9UBF9 498 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 RRP15Q9Y3B9 282 aaKnown RBP25■■□□□ 1.59
SSBP4-202ENST00000348495 A0A0G2JPF8 293 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 HNRNPCL2B2RXH8 293 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 HNRNPCL3B7ZW38 293 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 NKX2-8O15522 239 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 STX11O75558 287 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 HNRNPCL4P0DMR1 293 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 CHRNEQ04844 493 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 ATP1A1-AS1Q5TC04 95 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 GALNT10Q86SR1 603 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 THAP3Q8WTV1 239 aaPredicted RBP25■■□□□ 1.59
SSBP4-202ENST00000348495 THAP4Q8WY91 577 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 POLE3Q9NRF9 147 aa25■■□□□ 1.59
SSBP4-202ENST00000348495 ITGAMP11215 1152 aa24.99■■□□□ 1.59
SSBP4-202ENST00000348495 ETS2P15036 469 aa24.99■■□□□ 1.59
SSBP4-202ENST00000348495 CHAF1BQ13112 559 aa24.99■■□□□ 1.59
SSBP4-202ENST00000348495 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.99■■□□□ 1.59
SSBP4-202ENST00000348495 TCTN3Q6NUS6 607 aa24.99■■□□□ 1.59
SSBP4-202ENST00000348495 C16orf47Q6ZP98 133 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms