RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 OR52W1Q6IF63 320 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PRICKLE2Q7Z3G6 844 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PRSS35Q8N3Z0 413 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NAXEQ8NCW5 288 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 DPH2Q9BQC3 489 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TMEM208Q9BTX3 173 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FBRSL1Q9HCM7 1045 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PRDM7Q9NQW5 492 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 UBQLN4Q9NRR5 601 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 CBLCQ9ULV8 474 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MMACHCQ9Y4U1 282 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 COL1A2P08123 1366 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NPIPA7E9PJI5 369 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 GPR31O00270 319 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 GLCEO94923 617 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 C6orf47O95873 294 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TRBC1P01850 177 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 GSTP1P09211 210 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NPIPA8P0DM63 369 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 AHCYP23526 432 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FGF9P31371 208 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NRG3P56975 720 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PTPN11Q06124 597 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ARHGAP1Q07960 439 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TBPL2Q6SJ96 375 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 B3GNT9Q6UX72 402 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MBOAT1Q6ZNC8 495 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SYNPOQ8N3V7 929 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF610Q8N9Z0 462 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR5L2Q8NGL0 311 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR9A2Q8NGT5 310 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 LRRC15Q8TF66 581 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 HIST1H2BAQ96A08 127 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 HAVCR1Q96D42 359 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 RUSC1Q9BVN2 902 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NRBP2Q9NSY0 501 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FBXL3Q9UKT7 428 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 KIF1AQ12756 1690 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 LRP6O75581 1613 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 K7ERU9 68 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NPM3O75607 178 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 UBL3O95164 117 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PDE8BO95263 885 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NCK1P16333 377 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PSMB1P20618 241 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ALDH3B1P43353 468 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 HSF1Q00613 529 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OGDHQ02218 1023 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 LAPTM4AQ15012 233 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TREML2Q5T2D2 321 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NUP54Q7Z3B4 507 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MYPOPQ86VE0 399 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 KCNMB4Q86W47 210 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 DNAJB14Q8TBM8 379 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 EEF1AKMT1Q8WVE0 214 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PYCR2Q96C36 320 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SHISA4Q96DD7 197 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 C5orf34Q96MH7 638 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FCRL4Q96PJ5 515 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 UBL7Q96S82 380 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MESP1Q9BRJ9 268 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FAM124BQ9H5Z6 455 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 KLHL9Q9P2J3 617 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR52A1Q9UKL2 312 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TRAV19A0A0A6YYK7 116 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 A0A1B0GV72 72 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TRDV1A0A1B0GX56 115 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 G3V3G9 751 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SUSD5O60279 629 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR10H2O60403 315 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FZD7O75084 574 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ANXA9O76027 345 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR4F21O95013 312 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 IGHV2-5P01817 119 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SCGB1A1P11684 91 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TPT1P13693 172 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR4D2P58180 307 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TAS2R39P59534 338 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 HTR4Q13639 388 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 EOGTQ5NDL2 527 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 HBMQ6B0K9 141 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR4F3Q6IEY1 312 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FAHD2BQ6P2I3 314 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FAHD1Q6P587 224 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NDUFAF7Q7L592 441 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 CXXC5Q7LFL8 322 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ZDHHC21Q8IVQ6 265 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FSTL5Q8N475 847 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FBXO39Q8N4B4 442 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FAHD2AQ96GK7 314 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TCTN2Q96GX1 697 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MCEEQ96PE7 176 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PTGES2Q9H7Z7 377 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SLAMF7Q9NQ25 335 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MMP26Q9NRE1 261 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 COMMD3Q9UBI1 195 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FZD4Q9ULV1 537 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FIS1Q9Y3D6 152 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ANKRD26Q9UPS8 1709 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms