RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SPRED2Q7Z698 418 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 OR52N2Q8NGI0 321 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 MS4A3Q96HJ5 214 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 LINC00597Q9H2U6 94 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.1■□□□□ 0.33
PKP3-201ENST00000331563 SHISA3A0PJX4 238 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 ARRDC5A6NEK1 342 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 K7ERQ8 282 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 SIGLEC6O43699 453 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 KDELR3O43731 214 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 HLA-DPB1P04440 258 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 JUPP14923 745 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 CAPZA2P47755 286 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 MVDP53602 400 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 ZNF177Q13360 481 aaPredicted RBP17.1■□□□□ 0.33
PKP3-201ENST00000331563 SPIN4Q56A73 249 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 ADGRF1Q5T601 910 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 OXR1Q8N573 874 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 OR2T4Q8NH00 348 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 BCL2L14Q9BZR8 327 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 METTL17Q9H7H0 456 aaPredicted RBP17.1■□□□□ 0.33
PKP3-201ENST00000331563 DLL4Q9NR61 685 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 NKIRAS2Q9NYR9 191 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 ALPK3Q96L96 1907 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 ANAPC1Q9H1A4 1944 aa17.1■□□□□ 0.33
PKP3-201ENST00000331563 TRDV1A0A1B0GX56 115 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 TBL1XO60907 577 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 GDI2P50395 445 aaKnown RBP17.09■□□□□ 0.33
PKP3-201ENST00000331563 ARHGDIBP52566 201 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 SLC5A12Q1EHB4 618 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 CDKL4Q5MAI5 379 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 ATRAIDQ6UW56 229 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 TPGS1Q6ZTW0 290 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 SAMD12Q8N8I0 201 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 SCP2D1Q9UJQ7 156 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 GPR52Q9Y2T5 361 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 NUBP2Q9Y5Y2 271 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 PIKFYVEQ9Y2I7 2098 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 C5orf58C9J3I9 102 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 GABRPO00591 440 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 RGS11O94810 467 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 ACRV1P26436 265 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 ZNF630Q2M218 657 aaPredicted RBP17.09■□□□□ 0.33
PKP3-201ENST00000331563 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
PKP3-201ENST00000331563 LYPD4Q6UWN0 246 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 CACNG6Q9BXT2 260 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 CRISPLD2Q9H0B8 497 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 ZFYVE1Q9HBF4 777 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 IL26Q9NPH9 171 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 MED9Q9NWA0 146 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 TESQ9UGI8 421 aaKnown RBP17.09■□□□□ 0.33
PKP3-201ENST00000331563 CLEC4EQ9ULY5 219 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 CLEC4AQ9UMR7 237 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 INSL5Q9Y5Q6 135 aa17.09■□□□□ 0.33
PKP3-201ENST00000331563 PQLC2LA1A4F0 135 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 NME6O75414 186 aaPredicted RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 H1F0P07305 194 aaKnown RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 AHCYP23526 432 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 ELAVL4P26378 380 aaKnown RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 GABRR2P28476 465 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 DGKGP49619 791 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 PUM1Q14671 1186 aaKnown RBP eCLIP17.08■□□□□ 0.33
PKP3-201ENST00000331563 CHRNA6Q15825 494 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 ZNF385BQ569K4 471 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 CRB2Q5IJ48 1285 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 NHLRC3Q5JS37 347 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 ADNP2Q6IQ32 1131 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 CXorf57Q6NSI4 855 aaKnown RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 GPR135Q8IZ08 494 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 FAM26EQ8N5C1 309 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 COQ8AQ8NI60 647 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 HGDQ93099 445 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 TM6SF2Q9BZW4 377 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 ZNF436Q9C0F3 470 aaPredicted RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 TINAGL1Q9GZM7 467 aaPredicted RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 RNF32Q9H0A6 362 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.33
PKP3-201ENST00000331563 C1GALT1Q9NS00 363 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 GULP1Q9UBP9 304 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 PLCL2Q9UPR0 1127 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 PRKAB1Q9Y478 270 aa17.08■□□□□ 0.33
PKP3-201ENST00000331563 TRANK1O15050 2925 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 H7C2Y5 167 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 CBX7O95931 251 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 FABP1P07148 127 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 TFPIP10646 304 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 GKP32189 559 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 CCR6P51684 374 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 CDH4P55283 916 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 RPS7P62081 194 aaKnown RBP17.08■□□□□ 0.32
PKP3-201ENST00000331563 OPCMLQ14982 345 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 ATXN7L2Q5T6C5 722 aaPredicted RBP17.08■□□□□ 0.32
PKP3-201ENST00000331563 C3P1Q6ZMU1 363 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 GAREM2Q75VX8 874 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 ADAMTS19Q8TE59 1207 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 CXorf58Q96LI9 332 aa17.08■□□□□ 0.32
PKP3-201ENST00000331563 SFXN2Q96NB2 322 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms