RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 NDC1Q9BTX1 674 aa7.12□□□□□ -1.27
CDHR3-201ENST00000317716 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDHR3-201ENST00000317716 PIGUQ9H490 435 aa7.12□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF639Q9UID6 485 aa7.12□□□□□ -1.27
CDHR3-201ENST00000317716 KLHL21Q9UJP4 597 aa7.12□□□□□ -1.27
CDHR3-201ENST00000317716 STON1Q9Y6Q2 735 aa7.12□□□□□ -1.27
CDHR3-201ENST00000317716 RP1P56715 2156 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 LOC285556D6RIA3 1793 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 C5orf51A6NDU8 294 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 MAGEB4O15481 346 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SCO2O43819 266 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 EFCAB14O75071 495 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 UBL4AP11441 157 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 BMP1P13497 986 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 HSD3B1P14060 373 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 WASP42768 502 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 PITPNBP48739 271 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 VEGFCP49767 419 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SGSHP51688 502 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SKP1P63208 163 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TGM3Q08188 693 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 OPCMLQ14982 345 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TCTN1Q2MV58 587 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 MPPE1Q53F39 396 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SPIN4Q56A73 249 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 RTP2Q5QGT7 225 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 CNKSR3Q6P9H4 555 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF627Q7L945 461 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TAS1R1Q7RTX1 841 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NPAS4Q8IUM7 802 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 PDZD9Q8IXQ8 264 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 GPR135Q8IZ08 494 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 C12orf76Q8N812 135 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SORCS1Q8WY21 1168 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SUSD3Q96L08 255 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 KATNB1Q9BVA0 655 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 RNF32Q9H0A6 362 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NKX2-4Q9H2Z4 354 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF768Q9H5H4 540 aaKnown RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 STOX2Q9P2F5 926 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 P2RX2Q9UBL9 471 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NOP16Q9Y3C1 178 aaKnown RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 RIF1Q5UIP0 2472 aaKnown RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NPIPB15A6NHN6 443 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ANXA2P2A6NMY6 339 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 F5H0A9 414 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 RGS13O14921 159 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 COCHO43405 550 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ADAP00813 363 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ANXA2P07355 339 aaKnown RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 HPGDP15428 266 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 PSMB10P40306 273 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 CAPZA2P47755 286 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 GIPRP48546 466 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 WDR5P61964 334 aaKnown RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TP53I3Q53FA7 332 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TCTE1Q5JU00 501 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 CLVS2Q5SYC1 327 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 PRAMEF17Q5VTA0 474 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 BRAT1Q6PJG6 821 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 PTOV1Q86YD1 416 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NRMQ8IXM6 262 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SPAG16Q8N0X2 631 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 PROKR2Q8NFJ6 384 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 OR52N2Q8NGI0 321 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 FBXW5Q969U6 566 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ORAI1Q96D31 301 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SAMD8Q96LT4 415 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SFXN2Q96NB2 322 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 MCHR1Q99705 422 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 CFHR5Q9BXR6 569 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SUV39H2Q9H5I1 410 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 XKR8Q9H6D3 395 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NIPAL2Q9H841 368 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TCF7L1Q9HCS4 588 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 NPAP1Q9NZP6 1156 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 EXO1Q9UQ84 846 aaKnown RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 CKAP5Q14008 2032 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 CACNA1IQ9P0X4 2223 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 A0A1W2PRU2 124 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 IRGMA1A4Y4 181 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 HYKKA2RU49 373 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 HHLA1C9JL84 531 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 FAAHO00519 579 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 HOXA2O43364 376 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TXNL1O43396 289 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF432O94892 652 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 IL1AP01583 271 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 ELK1P19419 428 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 HOXD9P28356 352 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 PCGF2P35227 344 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 TBPL1P62380 186 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 MLLT11Q13015 90 aaPredicted RBP7.11□□□□□ -1.27
CDHR3-201ENST00000317716 VEZF1Q14119 521 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 IHHQ14623 411 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 SMCO1Q147U7 214 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 YIF1BQ5BJH7 314 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 RAB41Q5JT25 222 aa7.11□□□□□ -1.27
CDHR3-201ENST00000317716 METTL2BQ6P1Q9 378 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms