RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR6C74A6NCV1 312 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 TAAR5O14804 337 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 LALBAP00709 142 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 C5AR1P21730 350 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PPT1P50897 306 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CCNJQ5T5M9 372 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PIAS4Q8N2W9 510 aaPredicted RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 STEAP2Q8NFT2 490 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PROKR1Q8TCW9 393 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SFXN2Q96NB2 322 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 MOB1AQ9H8S9 216 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 KCNG2Q9UJ96 466 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 TRAPPC4Q9Y296 219 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF337Q9Y3M9 751 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 AKAP6Q13023 2319 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 THSD7AQ9UPZ6 1657 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 IGHEP01854 428 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 GPX2P18283 190 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PGCP20142 388 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 MSX2P35548 267 aaPredicted RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ABCG1P45844 678 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 RFX3P48380 749 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF84P51523 738 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CYP4F8P98187 520 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PET117Q6UWS5 81 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 NDUFAF7Q7L592 441 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SIAH1Q8IUQ4 282 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SECISBP2Q96T21 854 aaKnown RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SEC22CQ9BRL7 303 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 TIMM29Q9BSF4 260 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SLC19A3Q9BZV2 496 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CD300AQ9UGN4 299 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CPA4Q9UI42 421 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 GJB1P08034 283 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 VEGFCP49767 419 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ESCO2Q56NI9 601 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 TECTBQ96PL2 329 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ATOH8Q96SQ7 321 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 BIN3Q9NQY0 253 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 WIF1Q9Y5W5 379 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF407Q9C0G0 2248 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 MTMR11A4FU01 709 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 THBS1P07996 1170 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 BMXP51813 675 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CDNFQ49AH0 187 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PLA2G15Q8NCC3 412 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ZFAND1Q8TCF1 268 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF471Q9BX82 626 aaPredicted RBP8.37□□□□□ -1.07
COL6A5-202ENST00000312481 HES2Q9Y543 173 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 MEIOCA2RUB1 952 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 CTNNB1P35222 781 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ARFRP1Q13795 201 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 RNLSQ5VYX0 342 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 OR4F3Q6IEY1 312 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ULK3Q6PHR2 472 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 IQCHQ86VS3 1027 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 PXYLP1Q8TE99 480 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SLC25A46Q96AG3 418 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 SLC25A31Q9H0C2 315 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 YIPF1Q9Y548 306 aa8.37□□□□□ -1.07
COL6A5-202ENST00000312481 ARVCFO00192 962 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ADAM10O14672 748 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ITPKBP27987 946 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 FNDC1Q4ZHG4 1894 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TNFAIP8L2Q6P589 184 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ARMCX6Q7L4S7 300 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TAS1R3Q7RTX0 852 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 C6orf120Q7Z4R8 191 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TCEAL8Q8IYN2 117 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM163Q8TC26 289 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 PKP4Q99569 1192 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF107Q9UII5 783 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CAMK2AQ9UQM7 478 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 PCDHGC4Q9Y5F7 938 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 AGAP14A8MT82 685 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ERI3O43414 337 aaKnown RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 NDUFB5O43674 189 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 NUDT6P53370 316 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 OXA1LQ15070 435 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 FAM122CQ6P4D5 195 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 XKR5Q6UX68 686 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ABHD12BQ7Z5M8 362 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SCGB1C1Q8TD33 95 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 GTF2H4Q92759 462 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 FAM46BQ96A09 425 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ACSL6Q9UKU0 697 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 UGT2B7P16662 529 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CELP19835 753 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 OPRL1P41146 370 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CSKP41240 450 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CHRNA4P43681 627 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CTBSQ01459 385 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM115Q12893 351 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 RIN1Q13671 783 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 GPR19Q15760 415 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms