RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 RHCGQ9UBD6 479 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 CLEC2DQ9UHP7 191 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 CFAP20Q9Y6A4 193 aaKnown RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 GBF1Q92538 1859 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 MGAT4DA6NG13 374 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 PLA2G10O15496 165 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 IL1AP01583 271 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 SCG5P05408 212 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 ITPKAP23677 461 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 CHI3L1P36222 383 aaPredicted RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 CLDN20P56880 219 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 ERVK-25P63136 954 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 FLI1Q01543 452 aaPredicted RBP10.29□□□□□ -0.76
LSM3-201ENST00000306024 MACC1Q6ZN28 852 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 ADGRG3Q86Y34 549 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 GJD3Q8N144 294 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 OR4A15Q8NGL6 344 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 USP7Q93009 1102 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 UPRTQ96BW1 309 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 LINC00052Q96N35 136 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 SEC22CQ9BRL7 303 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 TSSK6Q9BXA6 273 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 GABARAPL1Q9H0R8 117 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 NT5DC2Q9H857 520 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 DYRK1BQ9Y463 629 aa10.29□□□□□ -0.76
LSM3-201ENST00000306024 IQCMA0A1B0GVH7 501 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 K7ESM1 405 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 APOC1P02654 83 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 SERPIND1P05546 499 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 RAB3BP20337 219 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 COL9A1P20849 921 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 PTX3P26022 381 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 ACVR2AP27037 513 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ACTR1BP42025 376 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CLCNKAP51800 687 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ACTR1AP61163 376 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 IRF4Q15306 451 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 TMEM52BQ4KMG9 183 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CCNJQ5T5M9 372 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 IER5LQ5T953 404 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CCDC71Q8IV32 467 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 TOMM5Q8N4H5 51 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 OR4M2Q8NGB6 313 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CXorf40BQ96DE9 158 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ZBED6CLQ96FA7 236 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 CPPED1Q9BRF8 314 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 PELOQ9BRX2 385 aaKnown RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 SLC52A3Q9NQ40 469 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 GPRC5BQ9NZH0 403 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ELF5Q9UKW6 265 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 FZD4Q9ULV1 537 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CA5BQ9Y2D0 317 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 PPIL1Q9Y3C6 166 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 SIT1Q9Y3P8 196 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 TRAV20A0A0B4J274 112 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 A0A1B0GVC2 190 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 GNG14A0A1W2PPG7 69 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 A6NIN4 97 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 SGCEO43556 437 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 VEGFDO43915 354 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ENTPD6O75354 484 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 STK16O75716 305 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 S100A6P06703 90 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 C8GP07360 202 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 DCNP07585 359 aaKnown RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 RRASP10301 218 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CXCL12P48061 93 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 STARP49675 285 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 IRF8Q02556 426 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ILF3Q12906 894 aaKnown RBP eCLIP10.28□□□□□ -0.76
LSM3-201ENST00000306024 NAE1Q13564 534 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ZNF169Q14929 603 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 PTGES3Q15185 160 aaKnown RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 HKDC1Q2TB90 917 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 UAP1L1Q3KQV9 507 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CCDC157Q569K6 752 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 HENMT1Q5T8I9 393 aaKnown RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 PIP5KL1Q5T9C9 394 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 HAGHLQ6PII5 290 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 OR52P1PQ8NH57 321 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 FOXJ1Q92949 421 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 PITX2Q99697 317 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 BARHL1Q9BZE3 327 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 TXNL4BQ9NX01 149 aaKnown RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 PCDHGB7Q9Y5F8 929 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 FKBP7Q9Y680 259 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CHD7Q9P2D1 2997 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 SH3D21A4FU49 640 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
LSM3-201ENST00000306024 ADPRHP54922 357 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CTBP2P56545 445 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 AGBL4Q5VU57 503 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 FAM198BQ6UWH4 519 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 ALKAL2Q6UX46 152 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 RASGEF1AQ8N9B8 481 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 MOSPD2Q8NHP6 518 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 LKAAEAR1Q8TD35 194 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CACNG6Q9BXT2 260 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 CYB5R1Q9UHQ9 305 aa10.28□□□□□ -0.76
LSM3-201ENST00000306024 A0A0B4J293 547 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms