RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ITPRIPL2Q3MIP1 535 aa2.53□□□□□ -2
CHD1-201ENST00000284049 AGBL2Q5U5Z8 902 aa2.53□□□□□ -2
CHD1-201ENST00000284049 PTRHD1Q6GMV3 140 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 TMEM53Q6P2H8 277 aa2.53□□□□□ -2
CHD1-201ENST00000284049 TMEM107Q6UX40 140 aa2.53□□□□□ -2
CHD1-201ENST00000284049 TPGS1Q6ZTW0 290 aa2.53□□□□□ -2
CHD1-201ENST00000284049 G2E3Q7L622 706 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ERICH1Q86X53 443 aa2.53□□□□□ -2
CHD1-201ENST00000284049 C1orf210Q8IVY1 113 aa2.53□□□□□ -2
CHD1-201ENST00000284049 PARP8Q8N3A8 854 aa2.53□□□□□ -2
CHD1-201ENST00000284049 KLHDC1Q8N7A1 406 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ACOT4Q8N9L9 421 aa2.53□□□□□ -2
CHD1-201ENST00000284049 DQX1Q8TE96 717 aaKnown RBP2.53□□□□□ -2
CHD1-201ENST00000284049 ZNF583Q96ND8 569 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ALS2CR12Q96Q35 445 aa2.53□□□□□ -2
CHD1-201ENST00000284049 GANQ9H2C0 597 aa2.53□□□□□ -2
CHD1-201ENST00000284049 MED4Q9NPJ6 270 aa2.53□□□□□ -2
CHD1-201ENST00000284049 RCOR3Q9P2K3 495 aaPredicted RBP2.53□□□□□ -2
CHD1-201ENST00000284049 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.53□□□□□ -2
CHD1-201ENST00000284049 TMCO1Q9UM00 188 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ANKRD31Q8N7Z5 1873 aa2.53□□□□□ -2
CHD1-201ENST00000284049 CARMIL3Q8ND23 1372 aa2.53□□□□□ -2
CHD1-201ENST00000284049 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.53□□□□□ -2.01
CHD1-201ENST00000284049 ANKDD1BA6NHY2 528 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 NAGAP17050 411 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 SLC26A3P40879 764 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 PPP3CCP48454 512 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 CCT3P49368 545 aaKnown RBP2.53□□□□□ -2.01
CHD1-201ENST00000284049 RAG2P55895 527 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 ZNF177Q13360 481 aaPredicted RBP2.53□□□□□ -2.01
CHD1-201ENST00000284049 EIF2B1Q14232 305 aaKnown RBP2.53□□□□□ -2.01
CHD1-201ENST00000284049 EXT1Q16394 746 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 SBK1Q52WX2 424 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 GRTP1Q5TC63 336 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 ASPHD1Q5U4P2 390 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 METTL11BQ5VVY1 283 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 NIPAL3Q6P499 406 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 WDR49Q8IV35 697 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 NELFCDQ8IXH7 590 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 ZBED8Q8IZ13 594 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 BEST3Q8N1M1 668 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 OR1L6Q8NGR2 347 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 ECHDC3Q96DC8 303 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 CCDC126Q96EE4 140 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 UQCC2Q9BRT2 126 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 SF3B5Q9BWJ5 86 aaKnown RBP2.53□□□□□ -2.01
CHD1-201ENST00000284049 STRADBQ9C0K7 418 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 SDCBP2Q9H190 292 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 MED20Q9H944 212 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 NOX4Q9NPH5 578 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 AURKAIP1Q9NWT8 199 aaPredicted RBP2.53□□□□□ -2.01
CHD1-201ENST00000284049 DUS2Q9NX74 493 aaKnown RBP2.53□□□□□ -2.01
CHD1-201ENST00000284049 AHSPQ9NZD4 102 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 MAB21L2Q9Y586 359 aa2.53□□□□□ -2.01
CHD1-201ENST00000284049 A0A0U1RQV5 110 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 A0A1W2PPV4 95 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 LOC390937A0A1W2PQ73 354 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 GOLGA8IPA6NC78 632 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 FAM74A7A6NL05 159 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TRPC5OSA6NMA1 111 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CENPXA8MT69 81 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 PDZK1P1A8MUH7 402 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 MPPED1O15442 326 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 B4GALT3O60512 393 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 BAG4O95429 457 aaKnown RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 DANCRP0C864 163 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NCK1P16333 377 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 IMPDH1P20839 514 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 MAOAP21397 527 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RPL9P32969 192 aaKnown RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 UGT1A5P35504 534 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 RANBP1P43487 201 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 TNFSF10P50591 281 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 CDH6P55285 790 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SELENOVP59797 346 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 HERV-K104P61576 105 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SIM1P81133 766 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 OGDHQ02218 1023 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 EGR4Q05215 589 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 KLF5Q13887 457 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 SPATS1Q496A3 300 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 FAM74A3Q4VXF1 159 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SOWAHCQ53LP3 525 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 BEX5Q5H9J7 111 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 LIN9Q5TKA1 542 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 DEGS2Q6QHC5 323 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 LRTM2Q8N967 370 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 MAGEC3Q8TD91 643 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SPRYD4Q8WW59 207 aaPredicted RBP2.52□□□□□ -2.01
CHD1-201ENST00000284049 LRRC3BQ96PB8 259 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 S1PR3Q99500 378 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 FMO2Q99518 471 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 EPYCQ99645 322 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 IL12RB2Q99665 862 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 SLC29A1Q99808 456 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 BBS2Q9BXC9 721 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 B3GNT4Q9C0J1 378 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 AMDHD2Q9Y303 409 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 NUP98P52948 1817 aa2.52□□□□□ -2.01
CHD1-201ENST00000284049 DDX60LQ5H9U9 1706 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms