RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 OGFRL1Q5TC84 451 aaPredicted RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 OR13C3Q8NGS6 347 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 SFXN5Q8TD22 340 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 COQ3Q9NZJ6 369 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 PRSS21Q9Y6M0 314 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 ITGB4P16144 1822 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 SLC35F4A4IF30 521 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 BCAT2O15382 392 aaPredicted RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 MMP2P08253 660 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 GABARAPL2P60520 117 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 RELAQ04206 551 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 PYHIN1Q6K0P9 492 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 CCBE1Q6UXH8 406 aaPredicted RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 ANKRD13BQ86YJ7 626 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 LIX1LQ8IVB5 337 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 MRPL38Q96DV4 380 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 PDLIM5Q96HC4 596 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 FAM46AQ96IP4 442 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 NEDD4LQ96PU5 975 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 C2orf42Q9NWW7 574 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 FARSAQ9Y285 508 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 A0A0U1RQS6 177 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 C17orf113A0A1B0GUU1 675 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 SLITRK5O94991 958 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 SCGB1D2O95969 90 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 RETP07949 1114 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 ZNF43P17038 809 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 MC3RP41968 323 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 ZNF81P51508 661 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 LEG1Q6P5S2 330 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 CEACAM19Q7Z692 300 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 SLC5A7Q9GZV3 580 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 PAK1IP1Q9NWT1 392 aaPredicted RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 TAAR2Q9P1P5 351 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 PTRH2Q9Y3E5 179 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 SH3D21A4FU49 640 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 SMAD9O15198 467 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 CASC3O15234 703 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 RGS9O75916 674 aaPredicted RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 UBL4AP11441 157 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 STOMP27105 288 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 HOXA9P31269 272 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 ADRA1AP35348 466 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 CMPK2Q5EBM0 449 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 TANGO2Q6ICL3 276 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 EIF5AL1Q6IS14 154 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 LRFN4Q6PJG9 635 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 ACBD7Q8N6N7 88 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 CIDECQ96AQ7 238 aaPredicted RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 TRIM43Q96BQ3 446 aaPredicted RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 LRR1Q96L50 414 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 PITX2Q99697 317 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 INPP5KQ9BT40 448 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 MMP27Q9H306 513 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 ERVK-18Q9QC07 812 aa12.56□□□□□ -0.4
SMG9-201ENST00000270066 CNOT11Q9UKZ1 510 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 NOP16Q9Y3C1 178 aaKnown RBP12.56□□□□□ -0.4
SMG9-201ENST00000270066 TRAV6A0A075B6T7 132 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 H3BUI4 141 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 ATE1O95260 518 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 HOXD12P35452 270 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 NKAPLQ5M9Q1 402 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 OR4K5Q8NGD3 323 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 OR13J1Q8NGT2 312 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
SMG9-201ENST00000270066 FAM118AQ9NWS6 357 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 NHSQ6T4R5 1651 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 ANKRD36CQ5JPF3 1778 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.55□□□□□ -0.4
SMG9-201ENST00000270066 ANKRD28O15084 1053 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 VEZF1Q14119 521 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 CHRFAM7AQ494W8 412 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 LIPKQ5VXJ0 399 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 NAGSQ8N159 534 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 SMOXQ9NWM0 555 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 C5AR2Q9P296 337 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 NAALAD2Q9Y3Q0 740 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 TRBV2A0A0J9YWF9 115 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 LINC01553A4QN01 128 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 ATXN1LP0C7T5 689 aaKnown RBP12.55□□□□□ -0.4
SMG9-201ENST00000270066 XCR1P46094 333 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 RGRP47804 291 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 FAM189BP81408 668 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 E2F1Q01094 437 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 PIGGQ5H8A4 983 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 GARNL3Q5VVW2 1013 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 NRMQ8IXM6 262 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 SPPL3Q8TCT6 385 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 FKBP14Q9NWM8 211 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 SLC35A3Q9Y2D2 325 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 SNAPC5O75971 98 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 CD3GP09693 182 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 DHRS4L1P0CG22 281 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 CKMT1AP12532 417 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 IRF2P14316 349 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 INHBCP55103 352 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 CTXN1P60606 82 aa12.55□□□□□ -0.4
SMG9-201ENST00000270066 CTSL3PQ5NE16 218 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms