RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 C8BP07358 591 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 SP1P08047 785 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 PLA2G2AP14555 144 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 PRPS1L1P21108 318 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 DIO3P55073 304 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 TRAP1Q12931 704 aaKnown RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 DUSP8Q13202 625 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 OPN5Q6U736 354 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF441Q8N8Z8 693 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 SLC22A8Q8TCC7 542 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 ADIPOR1Q96A54 375 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 TMEM125Q96AQ2 219 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 CIDECQ96AQ7 238 aaPredicted RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 SCMH1Q96GD3 660 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 ANKRA2Q9H9E1 313 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 HPF1Q9NWY4 346 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 UBDO15205 165 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 TCN1P20061 433 aaPredicted RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 NR0B1P51843 470 aaKnown RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 CLDN8P56748 225 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 MYBPC1Q00872 1141 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 OGFOD2Q6N063 350 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 RIMKLAQ8IXN7 391 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 GALNT4Q8N4A0 578 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 KRTCAP2Q8N6L1 136 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 TMEM178AQ8NBL3 297 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 C17orf47Q8NEP4 570 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 OR7G2Q8NG99 324 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 OR7A2PQ8NGA2 310 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 EME1Q96AY2 570 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 NMD3Q96D46 503 aaKnown RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 ZBED6CLQ96FA7 236 aaPredicted RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 PRPF18Q99633 342 aaKnown RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 HES7Q9BYE0 225 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 RYDENQ9NUL5 291 aaKnown RBP15.48■□□□□ 0.07
SDCBP-201ENST00000260130 MAP10Q9P2G4 905 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 PRODH2Q9UF12 536 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 AP4S1Q9Y587 144 aa15.48■□□□□ 0.07
SDCBP-201ENST00000260130 NADKO95544 446 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-201ENST00000260130 GPX3P22352 226 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 FRKP42685 505 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-201ENST00000260130 EMDP50402 254 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 RPS6KA3P51812 740 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 INAQ16352 499 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 MAPKAPK3Q16644 382 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 C6orf52Q5T4I8 152 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 CPTPQ5TA50 214 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 FHL5Q5TD97 284 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 B3GNT6Q6ZMB0 384 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 TAGAPQ8N103 731 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 ACSS1Q9NUB1 689 aaPredicted RBP15.47■□□□□ 0.07
SDCBP-201ENST00000260130 ASF1BQ9NVP2 202 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 DTX4Q9Y2E6 619 aa15.47■□□□□ 0.07
SDCBP-201ENST00000260130 A0A087WV62 115 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 PLOD2O00469 737 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 RASAL1O95294 804 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 MC3RP41968 323 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 MANFP55145 182 aaKnown RBP15.46■□□□□ 0.07
SDCBP-201ENST00000260130 C21orf58P58505 322 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 REP15Q6BDI9 236 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 TMEM107Q6UX40 140 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 ZNF551Q7Z340 670 aaPredicted RBP15.46■□□□□ 0.07
SDCBP-201ENST00000260130 GALNTL5Q7Z4T8 443 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 MDGA2Q7Z553 956 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 SPATA19Q7Z5L4 167 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 ALDH16A1Q8IZ83 802 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 ZFP28Q8NHY6 868 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 ELP4Q96EB1 424 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 MPP4Q96JB8 637 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 SPAG4Q9NPE6 437 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 ATAD3AQ9NVI7 634 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 MAPRE3Q9UPY8 281 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 NTNG1Q9Y2I2 539 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 NME2P1O60361 137 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 STAMBPO95630 424 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 SNRPB2P08579 225 aaKnown RBP15.46■□□□□ 0.07
SDCBP-201ENST00000260130 LAMP1P11279 417 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 NME2P22392 152 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 NR1H2P55055 460 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 HSPB3Q12988 150 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 AGKQ53H12 422 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 HACD2Q6Y1H2 254 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 NATD1Q8N6N6 113 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 GRHL3Q8TE85 626 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 NUDT8Q8WV74 236 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 MIB2Q96AX9 1013 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 COQ8BQ96D53 544 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 SGCZQ96LD1 299 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 TAAR6Q96RI8 345 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 ITPAQ9BY32 194 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 TIMMDC1Q9NPL8 285 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 AGPAT4Q9NRZ5 378 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 TAS2R9Q9NYW1 312 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 C19orf53Q9UNZ5 99 aaPredicted RBP15.46■□□□□ 0.07
SDCBP-201ENST00000260130 CROCCQ5TZA2 2017 aa15.46■□□□□ 0.07
SDCBP-201ENST00000260130 PDLIM1O00151 329 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 DCAF7P61962 342 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 APOFQ13790 326 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 IGFBP7Q16270 282 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 ZNF791Q3KP31 576 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms