RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 FOXA2Q9Y261 457 aaPredicted RBP4.07□□□□□ -1.76
TRA2B-201ENST00000259043 ZNF510Q9Y2H8 683 aa4.07□□□□□ -1.76
TRA2B-201ENST00000259043 GOLGA4Q13439 2230 aaKnown RBP4.07□□□□□ -1.76
TRA2B-201ENST00000259043 GON4LQ3T8J9 2241 aa4.07□□□□□ -1.76
TRA2B-201ENST00000259043 PCDH15Q96QU1 1955 aa4.07□□□□□ -1.76
TRA2B-201ENST00000259043 HELZP42694 1942 aaKnown RBP4.07□□□□□ -1.76
TRA2B-201ENST00000259043 IGLV7-46A0A075B6I9 117 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 A0A087X0K7 114 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 C5orf51A6NDU8 294 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 E9PQ18 207 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 EPHB6O15197 1021 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 CHADO15335 359 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 B4GALT5O43286 388 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 CHMP2AO43633 222 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 DFFBO76075 338 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 RHOBTB1O94844 696 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 LETM1O95202 739 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 TRIM16O95361 564 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 ALPPP05187 535 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 YES1P07947 543 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 ABHD2P08910 425 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 ALPPL2P10696 532 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 ZNF18P17022 549 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 AZU1P20160 251 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 BCKDHBP21953 392 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 LHCGRP22888 699 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 RDXP35241 583 aaKnown RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 CLDN17P56750 224 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 RPP38P78345 283 aaKnown RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 LAMTOR4Q0VGL1 99 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 TRDNQ13061 729 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 ARMCX4Q5H9R4 360 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 BLOC1S2Q6QNY1 142 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 RALGPS2Q86X27 583 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 LACC1Q8IV20 430 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 SERPINA12Q8IW75 414 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 BATF2Q8N1L9 274 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 CLEC1AQ8NC01 280 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 RNF149Q8NC42 400 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 TAF4BQ92750 862 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 MAGED4Q96JG8 741 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 PKP2Q99959 881 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 SYT15Q9BQS2 421 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 LRRC2Q9BYS8 371 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 UBXN6Q9BZV1 441 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 C8orf33Q9H7E9 229 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 RAB9BQ9NP90 201 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 XPNPEP1Q9NQW7 623 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 PHPT1Q9NRX4 125 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 EXOC1Q9NV70 894 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 HPF1Q9NWY4 346 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 TRIM10Q9UDY6 481 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 TRMT6Q9UJA5 497 aaKnown RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 GRID1Q9ULK0 1009 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 RPH3AQ9Y2J0 694 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 STRAPQ9Y3F4 350 aaKnown RBP4.06□□□□□ -1.76
TRA2B-201ENST00000259043 ANK1P16157 1881 aa4.06□□□□□ -1.76
TRA2B-201ENST00000259043 NID2Q14112 1375 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 DOPEY2Q9Y3R5 2298 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 A0A1B0GUA9 196 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 C2orf92A0A1B0GVN3 265 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ANKDD1BA6NHY2 528 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 I3L4J1 428 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 KRT33AO76009 404 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ERLIN2O94905 339 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 DUS4LO95620 317 aaKnown RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 CALM1P0DP23 149 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 CALM2P0DP24 149 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 CALM3P0DP25 149 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 DLATP10515 647 aaKnown RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 F3P13726 295 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ZNF10P21506 573 aaPredicted RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ELAVL4P26378 380 aaKnown RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 AXLP30530 894 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 SFNP31947 248 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 BRCC3P46736 316 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 EVCP57679 992 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 NUCB2P80303 420 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 PDE7AQ13946 482 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 HERC3Q15034 1050 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 PDK1Q15118 436 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 SNAI3Q3KNW1 292 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 FGD3Q5JSP0 725 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ZNF770Q6IQ21 691 aaPredicted RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 SLC8B1Q6J4K2 584 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 CD164L2Q6UWJ8 174 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 B3GLCTQ6Y288 498 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 RUFY3Q7L099 469 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ASPGQ86U10 573 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 THEM5Q8N1Q8 247 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 TEX9Q8N6V9 391 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 TMEM99Q8N816 258 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ZNF461Q8TAF7 563 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 FAM222BQ8WU58 562 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ULK4Q96C45 1275 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 CCDC51Q96ER9 411 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 EPSTI1Q96J88 318 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 C4orf45Q96LM5 186 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ZNF560Q96MR9 790 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 RIT2Q99578 217 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms