RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 A6NIN4 97 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 EDN1P05305 212 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 RETP07949 1114 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 MSX1P28360 303 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 PITPNBP48739 271 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 WNT4P56705 351 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 FGL1Q08830 312 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 FGFBP1Q14512 234 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 TMEM35AQ53FP2 167 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 C6orf132Q5T0Z8 1188 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 FAM198BQ6UWH4 519 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 BOLLQ8N9W6 283 aaKnown RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 RAB7BQ96AH8 199 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ZMYND19Q96E35 227 aaPredicted RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 ZDHHC12Q96GR4 267 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ACTRT3Q9BYD9 372 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 SLC25A18Q9H1K4 315 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 DCAF13Q9NV06 445 aaKnown RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 TRAV18A0A075B6X5 111 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 PEX12O00623 359 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 EVI2BP34910 448 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 CTXN1P60606 82 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ATAD3CQ5T2N8 411 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 PIP5KL1Q5T9C9 394 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 REV1Q9UBZ9 1251 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 TMEM14AQ9Y6G1 99 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 FAM221BA6H8Z2 402 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 FBXO45P0C2W1 286 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 PBX2P40425 430 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 HSD11B2P80365 405 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 RELAQ04206 551 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 DCP2Q8IU60 420 aaKnown RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 CPOQ8IVL8 374 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 MACROD1Q9BQ69 325 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ASF1BQ9NVP2 202 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 B3GALT1Q9Y5Z6 326 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 IGKV6-21A0A0C4DH24 114 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 HEPACAM2A8MVW5 462 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 GPR39O43194 453 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 LRRTM2O43300 516 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 JRKO75564 520 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 FGF4P08620 206 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 AQP2P41181 271 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 GSTM4Q03013 218 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 SPCS2Q15005 226 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 RAET1LQ5VY80 246 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 GDPD1Q8N9F7 314 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 SNIP1Q8TAD8 396 aaKnown RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 MYNNQ9NPC7 610 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 KCMF1Q9P0J7 381 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 PRSS21Q9Y6M0 314 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 SDC1P18827 310 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 PGCP20142 388 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 HRH2P25021 359 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 PCGF2P35227 344 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 MC3RP41968 323 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 LRIG1Q96JA1 1093 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 SMIM14Q96QK8 99 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 FN3KQ9H479 309 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 GPN2Q9H9Y4 310 aaPredicted RBP12.67□□□□□ -0.38
NEK4-201ENST00000233027 ARPC5O15511 151 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 HPGDSO60760 199 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 FAM205BPQ63HN1 556 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 SLC18B1Q6NT16 456 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 SERPINA12Q8IW75 414 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 ZNF597Q96LX8 424 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 GPR174Q9BXC1 333 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 IL26Q9NPH9 171 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 LRP6O75581 1613 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 IGKV6D-21A0A0A0MT36 114 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 IFNA5P01569 189 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 SGSHP51688 502 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 WDR53Q7Z5U6 358 aaPredicted RBP12.67□□□□□ -0.38
NEK4-201ENST00000233027 SCD5Q86SK9 330 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 KIF18BQ86Y91 864 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 ACPTQ9BZG2 426 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 CWH43Q9H720 699 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 CPNE5Q9HCH3 593 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 TEX10Q9NXF1 929 aaPredicted RBP12.67□□□□□ -0.38
NEK4-201ENST00000233027 CACNG2Q9Y698 323 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 TRAPPC13A5PLN9 417 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 TFP02787 698 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 CDK4P11802 303 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 RNH1P13489 461 aaKnown RBP12.67□□□□□ -0.38
NEK4-201ENST00000233027 GM2AP17900 193 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 HOXC5Q00444 222 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 MFSD13AQ14CX5 517 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 LARP4Q71RC2 724 aaKnown RBP eCLIP12.67□□□□□ -0.38
NEK4-201ENST00000233027 C7orf50Q9BRJ6 194 aaKnown RBP12.67□□□□□ -0.38
NEK4-201ENST00000233027 C20orf27Q9GZN8 174 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 RETREG1Q9H6L5 497 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 THSD1Q9NS62 852 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 PAHP00439 452 aa12.67□□□□□ -0.38
NEK4-201ENST00000233027 ZNF888P0CJ79 500 aaPredicted RBP12.67□□□□□ -0.38
NEK4-201ENST00000233027 VIPR2P41587 438 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms