RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Slc22a28B2RT89 552 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Prdx4O08807 274 aaKnown RBP15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Nr4a2Q06219 598 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Dtx3lQ3UIR3 748 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Ptpn18Q61152 453 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Pabpc2Q62029 628 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Nsg1Q62092 185 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Olfr406Q7TRX0 323 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Fam92aQ8BP22 355 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 LzicQ8K3C3 190 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Slc22a22Q8R0S9 554 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Plet1Q8VEN2 237 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Olfr643Q8VGY1 314 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Asb8Q91ZT9 288 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Slc22a30Q96LX3 552 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Smarcd2Q99JR8 531 aaKnown RBP15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 NwcQ9CQI4 244 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Slc25a46Q9CQS4 418 aa15.11■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gm13420A0A140LJJ2 248 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Tmem240B2RWJ3 173 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Rpl6P47911 296 aaKnown RBP15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Smad5P97454 465 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Krt76Q3UV17 594 aaKnown RBP15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Spin1Q61142 262 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Pan3Q640Q5 837 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Tpgs2Q66JT5 296 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Slc5a8Q8BYF6 611 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Nmral1Q8K2T1 309 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Txndc17Q9CQM5 123 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 LhppQ9D7I5 270 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Smim23Q9DAL0 136 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Kcnd3Q9Z0V1 655 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Trbv20A0A0B4J1H5 111 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Ajm1A2AJA9 974 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Ankle1A8VU90 534 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gm436B1AVU6 407 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Zfp40B1B1D3 796 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Olfr619E9PV95 320 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Zfp995E9Q6M3 437 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Efna3O08545 230 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Kcnj1O88335 372 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Cntn1P12960 1020 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Cma1P21844 247 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Prss55Q14BX2 321 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Cyb5r4Q3TDX8 528 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gen1Q8BMI4 908 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Scara5Q8K299 491 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Spns1Q8R0G7 528 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 H2afjQ8R1M2 129 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Olfr868Q8VFI8 309 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Senp8Q9D2Z4 221 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gpr88Q9EPB7 384 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Phc2Q9QWH1 850 aa15.1■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Vmn1r90A0A087WR36 309 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Igkv4-86A0A0G2JGE7 114 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Ect2lA0A140LIP2 953 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gm8127E9Q0P0 100 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gm8094K7N6U8 211 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gja4P28235 333 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Cfl2P45591 166 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Barhl1P63157 327 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Elmod1Q3V1U8 326 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Slc26a10Q5EBI0 492 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Cnrip1Q5M8N0 164 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Olfr728Q7TRM6 311 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Ap4e1Q80V94 1122 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Znf592Q8BHZ4 1262 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Dppa5aQ9CQS7 118 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Srfbp1Q9CZ91 441 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Lman2Q9DBH5 358 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Upf1Q9EPU0 1124 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Nusap1Q9ERH4 427 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 PolmQ9JIW4 496 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Btnl10Q9JK39 275 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Acot2Q9QYR9 453 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Khdrbs3Q9R226 346 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 UxtQ9WTZ0 157 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Creb3l1Q9Z125 519 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gm3854A0A1B0GSS6 495 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Gm14399A2ARW8 610 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Smim18J3QNP2 93 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Zw10O54692 779 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 IlkO55222 452 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Atxn2O70305 1285 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 CtssO70370 340 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Tgfb1P04202 390 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Etv1P41164 477 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Cd63P41731 238 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Dbx1P52950 335 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 SnrpnP63163 240 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Olfr1231Q7TQZ8 313 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Zc3hc1Q80YV2 501 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 EloaQ8CB77 773 aaKnown RBP15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Fam149aQ8CFV2 787 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 C1raQ8CG16 707 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Znf24Q91VN1 368 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Snx4Q91YJ2 450 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Desi1Q9CQT7 168 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Etv5Q9CXC9 510 aa15.09■□□□□ 0.01
Ckap4-201ENSMUST00000053871 Sertad3Q9ERC3 197 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms