RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ATG9BQ674R7 924 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TOMM5Q8N4H5 51 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM178AQ8NBL3 297 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 AURKBQ96GD4 344 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TCTN2Q96GX1 697 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 CCDC120Q96HB5 630 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM80Q96HE8 168 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TUBA1CQ9BQE3 449 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 RNF38Q9H0F5 515 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 RXFP3Q9NSD7 469 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 OBP2AQ9NY56 170 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 NAALAD2Q9Y3Q0 740 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ZNF175Q9Y473 711 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ACOX3O15254 700 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 LCATP04180 440 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 YES1P07947 543 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 IVDP26440 423 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ARL3P36405 182 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ATP4BP51164 291 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ARHGAP19Q14CB8 494 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 SIX1Q15475 284 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 GRHL2Q6ISB3 625 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TUBA3EQ6PEY2 450 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 COMMD6Q7Z4G1 85 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 UBE2Q1Q7Z7E8 422 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 SPERTQ8NA61 448 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 INO80EQ8NBZ0 244 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 PSD4Q8NDX1 1056 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 OR2L2Q8NH16 312 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 LRRC20Q8TCA0 184 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 BIRC7Q96CA5 298 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ENKD1Q9H0I2 346 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 SCAMP2O15127 329 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 FLRT2O43155 660 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 MMP2P08253 660 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ATF6P18850 670 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 FNTBP49356 437 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 CRISP1P54107 249 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 S100A10P60903 97 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 SLC10A2Q12908 348 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM184AQ6ZMB5 413 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 C16orf78Q8WTQ4 265 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 NECAB3Q96P71 396 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 OR6C1Q96RD1 312 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ITPAQ9BY32 194 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 FKBP14Q9NWM8 211 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 IL17CQ9P0M4 197 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ERVK-19Q9WJR5 959 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 FARSAQ9Y285 508 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 ACTL7AQ9Y615 435 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 MYH10P35580 1976 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 A0A0G2JPF8 293 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 BLACEA4D250 179 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 HNRNPCL3B7ZW38 293 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 OR2T1O43869 369 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 SRPX2O60687 465 aaPredicted RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 HNRNPCL4P0DMR1 293 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 CD27P26842 260 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 HLA-FP30511 346 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 CTHP32929 405 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 CDKN2DP55273 166 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 DCDP81605 110 aaKnown RBP9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 VMACQ2NL98 169 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TMEM31Q5JXX7 168 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 GPR26Q8NDV2 337 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 TSPEARQ8WU66 669 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 FAM129BQ96TA1 746 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 KCNK12Q9HB15 430 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 AGPAT4Q9NRZ5 378 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 AASSQ9UDR5 926 aa9.28□□□□□ -0.92
CLTCL1-211ENST00000621271 LOC100130705A0A1B0GUX0 176 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 SOBPA7XYQ1 873 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 PHYHO14832 338 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 PVRP15151 417 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 MAGEA2P43356 314 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 DCDC1P59894 354 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 IL20RBQ6UXL0 311 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 CDHR3Q6ZTQ4 885 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 OR8J3Q8NGG0 315 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 CCDC115Q96NT0 180 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 PIP5K1AQ99755 562 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 ATP13A2Q9NQ11 1180 aa9.27□□□□□ -0.92
CLTCL1-211ENST00000621271 C5P01031 1676 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 NOTOA8MTQ0 251 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 ANHXE9PGG2 379 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 FBP2O00757 339 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 C7P10643 843 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 MAZP56270 477 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 POU4F2Q12837 409 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 FAM26DQ5JW98 314 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 GAREM2Q75VX8 874 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 SNX29P2Q8IUI4 249 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 PLD6Q8N2A8 252 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 GATA6Q92908 595 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 HCAR1Q9BXC0 346 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 SCP2D1Q9UJQ7 156 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 CNOT11Q9UKZ1 510 aaKnown RBP9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 DRGXA6NNA5 263 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 H0YAE9 185 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms