RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SUCOQ9UBS9 1254 aaKnown RBP7.45□□□□□ -1.22
CPNE3-209ENST00000620393 COPS7AQ9UBW8 275 aa7.45□□□□□ -1.22
CPNE3-209ENST00000620393 EGFL7Q9UHF1 273 aa7.45□□□□□ -1.22
CPNE3-209ENST00000620393 LIPT1Q9Y234 373 aa7.45□□□□□ -1.22
CPNE3-209ENST00000620393 GPR55Q9Y2T6 319 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF451Q9Y4E5 1061 aa7.45□□□□□ -1.22
CPNE3-209ENST00000620393 PCDHGB3Q9Y5G1 929 aa7.45□□□□□ -1.22
CPNE3-209ENST00000620393 KCNE3Q9Y6H6 103 aa7.45□□□□□ -1.22
CPNE3-209ENST00000620393 DMXL1Q9Y485 3027 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 C2orf92A0A1B0GVN3 265 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 TMEM247A6NEH6 219 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CXCR6O00574 342 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 PEX12O00623 359 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 GSTA4O15217 222 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 GMNNO75496 209 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CIB2O75838 187 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ZFAND5O76080 213 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CT45A8P0DMV1 189 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CT45A9P0DMV2 189 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 NR2F1P10589 423 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 COX6A1P12074 109 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ICAM2P13598 275 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 LIFP15018 202 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 OTX2P32243 289 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 PCGF2P35227 344 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 SOX11P35716 441 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CLCN2P51788 898 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CORO7P57737 925 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 PSG6Q00889 435 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 SCARB2Q14108 478 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 GNA13Q14344 377 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ZNHIT3Q15649 155 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 MAPK11Q15759 364 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 EXT1Q16394 746 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 DUSP5Q16690 384 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ARHGAP11BQ3KRB8 267 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CT45A2Q5DJT8 189 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ATAD3BQ5T9A4 648 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 C1orf146Q5VVC0 180 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 AP1ARQ63HQ0 302 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 PLAG1Q6DJT9 500 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 HEPHL1Q6MZM0 1159 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 HSDL2Q6YN16 418 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 SLC29A4Q7RTT9 530 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 WDR53Q7Z5U6 358 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 DHFR2Q86XF0 187 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 RAB43Q86YS6 212 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 SLC30A8Q8IWU4 369 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 AMER2Q8N7J2 671 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ANKFN1Q8N957 763 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ZSCAN1Q8NBB4 408 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 FAM13CQ8NE31 585 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CHDHQ8NE62 594 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 HIPK4Q8NE63 616 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 OR52E4Q8NGH9 312 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 OR5L2Q8NGL0 311 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 OR8K3Q8NH51 312 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 M1APQ8TC57 530 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 FAM110BQ8TC76 370 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 GPR151Q8TDV0 419 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ELP5Q8TE02 316 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ADAMTS17Q8TE56 1095 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 WDR60Q8WVS4 1066 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 JADE3Q92613 823 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ADIPOR1Q96A54 375 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 TP53INP1Q96A56 240 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 CCDC124Q96CT7 223 aaKnown RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ASB9Q96DX5 294 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 VMP1Q96GC9 406 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 IP6K3Q96PC2 410 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 BTBD9Q96Q07 612 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 TRNT1Q96Q11 434 aaKnown RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 SDF2Q99470 211 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 BTBD2Q9BX70 525 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 DENND2DQ9H6A0 471 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 BCL2L10Q9HD36 194 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 MMP25Q9NPA2 562 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ACTR3BQ9P1U1 418 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 P2RX2Q9UBL9 471 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF223Q9UK11 482 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 SNX13Q9Y5W8 968 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 MRPS18BQ9Y676 258 aaKnown RBP7.44□□□□□ -1.22
CPNE3-209ENST00000620393 PIEZO1Q92508 2521 aa7.44□□□□□ -1.22
CPNE3-209ENST00000620393 AHCTF1Q8WYP5 2266 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 NSG1A0A0A6YYJ2 146 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 A0A0G2JPF8 293 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 GXYLT2A0PJZ3 443 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 A8MVJ9 347 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 HNRNPCL2B2RXH8 293 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 HNRNPCL3B7ZW38 293 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 C5orf58C9J3I9 102 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 M0QX08 132 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 TO15178 435 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 SLC28A2O43868 658 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 GCM2O75603 506 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-209ENST00000620393 PGM3O95394 542 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 STAMBPO95630 424 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 AK1P00568 194 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 HPP00738 406 aa7.43□□□□□ -1.22
CPNE3-209ENST00000620393 GUSBP08236 651 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms