RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PTPRRQ15256 657 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 BRICD5Q6PL45 260 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TMIGD1Q6UXZ0 262 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TMPRSS11AQ6ZMR5 421 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PLD3Q8IV08 490 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TMEM165Q9HC07 324 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 WSB2Q9NYS7 404 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 SIRT4Q9Y6E7 314 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 TTC3P53804 2025 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RNASEK-C17orf49H0YIS7 233 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GABARAPH6UMI1 98 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GABARAPO95166 117 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 HSPA7P48741 367 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TPMTP51580 245 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CATR1Q13166 79 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 NXNL2Q5VZ03 156 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 HBMQ6B0K9 141 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LIN54Q6MZP7 749 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 C11orf63Q6NUN7 778 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SHFQ7M4L6 423 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RDH10Q8IZV5 341 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 WDR55Q9H6Y2 383 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 SLC6A20Q9NP91 592 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ENPP5Q9UJA9 477 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 KLHL21Q9UJP4 597 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LINC01565O15544 149 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PRKD3O94806 890 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CCNE2O96020 404 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLBPQ14493 270 aaKnown RBP eCLIP3.16□□□□□ -1.9
LPP-220ENST00000617246 C4orf46Q504U0 113 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLC16A14Q7RTX9 510 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 MEX3DQ86XN8 651 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 C12orf56Q8IXR9 622 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TMEM217Q8N7C4 229 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ITFG1Q8TB96 612 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 THAP3Q8WTV1 239 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 PIK3IP1Q96FE7 263 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GRAMD2BQ96HH9 432 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 NSMCE2Q96MF7 247 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CCDC115Q96NT0 180 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLC40A1Q9NP59 571 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 URGCP-MRPS24S4R325 110 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 UBE2QL1A1L167 161 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TRIM49BA6NDI0 452 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GNB5O14775 395 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SCAF4O95104 1147 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 CRHR1P34998 444 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CDK6Q00534 326 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SF3A3Q12874 501 aaKnown RBP eCLIP3.16□□□□□ -1.9
LPP-220ENST00000617246 FAPQ12884 760 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SOHLH1Q5JUK2 328 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ATAD3CQ5T2N8 411 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 OR52W1Q6IF63 320 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SMYD4Q8IYR2 804 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 PNPLA1Q8N8W4 532 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CIB1Q99828 191 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLC22A4Q9H015 551 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 MID1IP1Q9NPA3 183 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SEMA4BQ9NPR2 832 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 NOCTQ9UK39 431 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 NEU2Q9Y3R4 380 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 KLRG2A4D1S0 409 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 SIGLEC16A6NMB1 481 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 F7P08709 466 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 CD33P20138 364 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 DPP4P27487 766 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLC22A10Q63ZE4 541 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ANKMY2Q8IV38 441 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LGI4Q8N135 537 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 OR4K2Q8NGD2 314 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLC25A43Q8WUT9 341 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 ZBTB8AQ96BR9 441 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 KCTD15Q96SI1 283 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 CST11Q9H112 138 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 DENND2DQ9H6A0 471 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 KAT8Q9H7Z6 458 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 EXOSC4Q9NPD3 245 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 MYADML2A6NDP7 307 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZNF785A8K8V0 405 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 HIDE1A8MVS5 230 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 OR4E1P0C645 316 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PTPN4P29074 926 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ARR3P36575 388 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 CAPZBP47756 277 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SERINC3Q13530 473 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 RBM39Q14498 530 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 BBS12Q6ZW61 710 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZNF101Q8IZC7 436 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 LNX2Q8N448 690 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ZNF548Q8NEK5 533 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 ABHD10Q9NUJ1 306 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 THYN1Q9P016 225 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 H6PDO95479 791 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 H2BFMP0C1H6 154 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ALOX12P18054 663 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 MAPK3P27361 379 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 MCCD1P59942 119 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 GUCY2DQ02846 1103 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 GSG1Q2KHT4 349 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms