RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 RNASE6Q93091 150 aaKnown RBP17.32■□□□□ 0.36
CDX1-202ENST00000616154 CTHRC1Q96CG8 243 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 KCNA7Q96RP8 456 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 TMUB1Q9BVT8 246 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 FAIM2Q9BWQ8 316 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 SHCBP1LQ9BZQ2 653 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 CLEC4MQ9H2X3 399 aaPredicted RBP17.32■□□□□ 0.36
CDX1-202ENST00000616154 MID1IP1Q9NPA3 183 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 ZNF639Q9UID6 485 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 ST6GALNAC2Q9UJ37 374 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 TIMM22Q9Y584 194 aa17.32■□□□□ 0.36
CDX1-202ENST00000616154 KDM4EB2RXH2 506 aaPredicted RBP17.31■□□□□ 0.36
CDX1-202ENST00000616154 NPIPB8E9PQR5 432 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 DRD2P14416 443 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 CASP3P42574 277 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 MASP1P48740 699 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 FOXA1P55317 472 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 MAP4K2Q12851 820 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 SF3B4Q15427 424 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDX1-202ENST00000616154 CEBPEQ15744 281 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 PRICKLE4Q2TBC4 344 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 KRTAP21-3Q3LHN1 58 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 FLYWCH1Q4VC44 716 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 C6orf163Q5TEZ5 329 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 LIPMQ5VYY2 423 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 VASNQ6EMK4 673 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 POMZP3Q6PJE2 187 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 RNF165Q6ZSG1 346 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 MMP21Q8N119 569 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 CCNYL1Q8N7R7 359 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 ANKRD42Q8N9B4 389 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 CHDHQ8NE62 594 aaPredicted RBP17.31■□□□□ 0.36
CDX1-202ENST00000616154 FAM222BQ8WU58 562 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 NTNG2Q96CW9 530 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 HSPBAP1Q96EW2 488 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 APIPQ96GX9 242 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 TMEM41AQ96HV5 264 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 CCM2LQ9NUG4 571 aaPredicted RBP17.31■□□□□ 0.36
CDX1-202ENST00000616154 ZNF629Q9UEG4 869 aaPredicted RBP17.31■□□□□ 0.36
CDX1-202ENST00000616154 FOXD3Q9UJU5 478 aaPredicted RBP17.31■□□□□ 0.36
CDX1-202ENST00000616154 PSME2Q9UL46 239 aa17.31■□□□□ 0.36
CDX1-202ENST00000616154 A6NNC1 897 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 PCDH7O60245 1069 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 CD99P14209 185 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 CSNK2A2P19784 350 aaPredicted RBP17.3■□□□□ 0.36
CDX1-202ENST00000616154 ALDH3A1P30838 453 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 TIA1P31483 386 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDX1-202ENST00000616154 WNT3P56703 355 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 HMGCS1Q01581 520 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 ACSM2AQ08AH3 577 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 NSUN5P2Q63ZY6 315 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 ACSM2BQ68CK6 577 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 C10orf107Q8IVU9 208 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 VWA5B2Q8N398 1253 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 FAM76AQ8TAV0 307 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDX1-202ENST00000616154 CNRIP1Q96F85 164 aaPredicted RBP17.3■□□□□ 0.36
CDX1-202ENST00000616154 RMND5BQ96G75 393 aaPredicted RBP17.3■□□□□ 0.36
CDX1-202ENST00000616154 METTL2AQ96IZ6 378 aaKnown RBP17.3■□□□□ 0.36
CDX1-202ENST00000616154 GNRHR2Q96P88 292 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 TRMOQ9BU70 441 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 TNFRSF12AQ9NP84 129 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 MAT2BQ9NZL9 334 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 EHD3Q9NZN3 535 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 HEY2Q9UBP5 337 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 MED12Q93074 2177 aa17.3■□□□□ 0.36
CDX1-202ENST00000616154 CD8B2A6NJW9 211 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 IL2RAP01589 272 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 NT5EP21589 574 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 GPX3P22352 226 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 ABCD3P28288 659 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 ZNF136P52737 540 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 DUSP2Q05923 314 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 HHATQ5VTY9 493 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 TIGD3Q6B0B8 471 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 TMEM81Q6P7N7 255 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 TGIF2LYQ8IUE0 185 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 PRR22Q8IZ63 422 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 SAMD14Q8IZD0 417 aaPredicted RBP17.29■□□□□ 0.36
CDX1-202ENST00000616154 CCDC63Q8NA47 563 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 ZNF675Q8TD23 568 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 ERP27Q96DN0 273 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 MECRQ9BV79 373 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 UGT2B28Q9BY64 529 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 LIME1Q9H400 295 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 CBLCQ9ULV8 474 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 CAMK2AQ9UQM7 478 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 DLGAP4Q9Y2H0 992 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 SLC6A5Q9Y345 797 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 CCL27Q9Y4X3 112 aa17.29■□□□□ 0.36
CDX1-202ENST00000616154 FLNAP21333 2647 aaKnown RBP17.28■□□□□ 0.36
CDX1-202ENST00000616154 TRIM13O60858 407 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 PPM1BO75688 479 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 RSL1D1O76021 490 aaKnown RBP17.28■□□□□ 0.36
CDX1-202ENST00000616154 ABCB1P08183 1280 aaPredicted RBP17.28■□□□□ 0.36
CDX1-202ENST00000616154 IL3P08700 152 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 NAGAP17050 411 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 BMP7P18075 431 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 PRPH2P23942 346 aa17.28■□□□□ 0.36
CDX1-202ENST00000616154 PTPN6P29350 595 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms