RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 CTSFQ9UBX1 484 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 CHRNA9Q9UGM1 479 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 ASIC3Q9UHC3 531 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 NARFQ9UHQ1 456 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF490Q9ULM2 529 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 SATB2Q9UPW6 733 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 NIP7Q9Y221 180 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.35□□□□□ -2.031e-6■□□□□ 10.8
HMGB1P24-202ENST00000615653 SMAD5-AS1Q9Y6J3 95 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 PHLPP2Q6ZVD8 1323 aa2.35□□□□□ -2.03
HMGB1P24-202ENST00000615653 CACNA1FO60840 1977 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 LOC105371242A0A075B767 164 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 IGKV3D-15A0A087WSY6 115 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRAV26-1A0A087WT03 109 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 A0A087X0K7 114 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 GOLGA8QA0A0J9YX86 632 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM120BA0PK00 339 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 RAB19A4D1S5 217 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 ANKUB1A6NFN9 424 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRPC5OSA6NMA1 111 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 A8MUA0 341 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 E9PMD0 336 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 GOLGA8MH3BSY2 632 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CLDN5O00501 218 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CHEK1O14757 476 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 BCKDKO14874 412 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 ARPC3O15145 178 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 HDAC3O15379 428 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TPST2O60704 377 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 HCN1O60741 890 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDC123O75794 336 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 LCA5LO95447 670 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 H6PDO95479 791 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CPNE6O95741 557 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 GLAP06280 429 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 KRT7P08729 469 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CLTAP09496 248 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF883P0CG24 379 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 HSMCR30P0CW71 290 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CD22P20273 847 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 HNF1AP20823 631 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 SSTR1P30872 391 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 HOXA6P31267 233 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 YWHABP31946 246 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 OTX1P32242 354 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 PCK1P35558 622 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 PTGFRP43088 359 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDX1P47902 265 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CSNK1EP49674 416 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 GDI2P50395 445 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 NDST1P52848 882 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 THOP1P52888 689 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 PPP2R2BQ00005 443 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 PLOD1Q02809 727 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 MBTD1Q05BQ5 628 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 SULT2A1Q06520 285 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 IL10RBQ08334 325 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CUL3Q13618 768 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 BTG3Q14201 252 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRIP10Q15642 601 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 MEP1AQ16819 746 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 MOGAT2Q3SYC2 334 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 LBHQ53QV2 105 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TTMPQ5BVD1 217 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CMPK2Q5EBM0 449 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 SAPCD1Q5SSQ6 148 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 HHATQ5VTY9 493 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 NKAIN2Q5VXU1 208 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 PRR27Q6MZM9 219 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 MFSD12Q6NUT3 480 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM53Q6P2H8 277 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CCDC137Q6PK04 289 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CBLN3Q6UW01 205 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM107Q6UX40 140 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CDHR3Q6ZTQ4 885 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 NLRP9Q7RTR0 991 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 BHLHA15Q7RTS1 189 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 SNX20Q7Z614 316 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TRPT1Q86TN4 253 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 MYPOPQ86VE0 399 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 LRRC6Q86X45 466 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 VRK2Q86Y07 508 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 RBM45Q8IUH3 476 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 CCDC36Q8IYA8 594 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 SYT14Q8NB59 555 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 COLGALT1Q8NBJ5 622 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 SIDT2Q8NBJ9 832 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF485Q8NCK3 441 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM104Q8NE00 496 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 FBXL13Q8NEE6 735 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR4K14Q8NGD5 310 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 OR5D13Q8NGL4 314 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 RAET1EQ8TD07 263 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 DTX3LQ8TDB6 740 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 ZNF473Q8WTR7 871 aaKnown RBP2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 TMEM190Q8WZ59 177 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 PIGBQ92521 554 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 HAS2Q92819 552 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 OPTNQ96CV9 577 aa2.34□□□□□ -2.03
HMGB1P24-202ENST00000615653 FAM122AQ96E09 287 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms