RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TMEM81Q6P7N7 255 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ANGPTL8Q6UXH0 198 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 LARP4Q71RC2 724 aaKnown RBP eCLIP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PM20D2Q8IYS1 436 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ANKRD42Q8N9B4 389 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 OR7G2Q8NG99 324 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ITLN2Q8WWU7 325 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 TMBIM1Q969X1 311 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ELP4Q96EB1 424 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 TUBB1Q9H4B7 451 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 GLIPR2Q9H4G4 154 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ACSS1Q9NUB1 689 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ARGLU1Q9NWB6 273 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 ALKBH4Q9NXW9 302 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 NOP53Q9NZM5 478 aaKnown RBP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 C19orf53Q9UNZ5 99 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 DTX4Q9Y2E6 619 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 RAP2CQ9Y3L5 183 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 POLEQ07864 2286 aa11.31□□□□□ -0.6
CBWD3-208ENST00000612050 SPENQ96T58 3664 aaKnown RBP11.31□□□□□ -0.6
CBWD3-208ENST00000612050 A0A1B0GVC2 190 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 TMEM233B4DJY2 109 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 HNRNPRO43390 633 aaKnown RBP11.3□□□□□ -0.6
CBWD3-208ENST00000612050 CLDN14O95500 239 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 BCKDHAP12694 445 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 ACVR2AP27037 513 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 RPL14P50914 215 aaKnown RBP11.3□□□□□ -0.6
CBWD3-208ENST00000612050 SMU1Q2TAY7 513 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 LSM12Q3MHD2 195 aaKnown RBP11.3□□□□□ -0.6
CBWD3-208ENST00000612050 GXYLT1Q4G148 440 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 ATG16L1Q676U5 607 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 B3GNT6Q6ZMB0 384 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 C3P1Q6ZMU1 363 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 OR10Q1Q8NGQ4 319 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 OR2T11Q8NH01 316 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 CLHC1Q8NHS4 586 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 NEIL3Q8TAT5 605 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 SDCCAG3Q96C92 435 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 SLC35A4Q96G79 324 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 EGLN2Q96KS0 407 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 FCRL1Q96LA6 429 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 VSTM2LQ96N03 204 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 ADOQ96SZ5 270 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 ZDHHC2Q9UIJ5 367 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 CBLCQ9ULV8 474 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 C15orf41Q9Y2V0 281 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 PCDHGB3Q9Y5G1 929 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 EXPH5Q8NEV8 1989 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 MYO7BQ6PIF6 2116 aa11.3□□□□□ -0.6
CBWD3-208ENST00000612050 DIDO1Q9BTC0 2240 aaKnown RBP11.3□□□□□ -0.6
CBWD3-208ENST00000612050 ASH1LQ9NR48 2969 aaKnown RBP11.29□□□□□ -0.6
CBWD3-208ENST00000612050 GNB5O14775 395 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 SCAMP2O15127 329 aaKnown RBP11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CFLARO15519 480 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 ICOSLGO75144 302 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 UGT2B11O75310 529 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 TRIM3O75382 744 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CBR3O75828 277 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 SOX30O94993 753 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 KRT16P08779 473 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CT45A8P0DMV1 189 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CT45A9P0DMV2 189 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 PRPS1L1P21108 318 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 TACR1P25103 407 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 HTR1EP28566 365 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 PRIM2P49643 509 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 PRKAG1P54619 331 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 PDCD2Q16342 344 aaPredicted RBP11.29□□□□□ -0.6
CBWD3-208ENST00000612050 UGT3A2Q3SY77 523 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 SPDYE7PQ495Y7 208 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CT45A2Q5DJT8 189 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 XKR7Q5GH72 579 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CPTPQ5TA50 214 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 IL23RQ5VWK5 629 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 TIGD3Q6B0B8 471 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 BHLHB9Q6PI77 547 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 OR2L13Q8N349 312 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CDRT4Q8N9R6 151 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 OR5M9Q8NGP3 310 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 OR14L1PQ8NHC6 308 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 LRRC46Q96FV0 321 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 MS4A4EQ96PG1 132 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 C1orf50Q9BV19 199 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 EQTNQ9NQ60 294 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 BAIAP2L1Q9UHR4 511 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 PCDHGB4Q9UN71 923 aa11.29□□□□□ -0.6
CBWD3-208ENST00000612050 A0A1W2PRB8 838 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 TMEM120BA0PK00 339 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 LRRC3CA6NJW4 275 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 UPK1AO00322 258 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 SNPHO15079 494 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 EMC8O43402 210 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 WISP2O76076 250 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 HPNP05981 417 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 COX6B1P14854 86 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 HPGDP15428 266 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms