RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 TAS2R9Q9NYW1 312 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 FETUBQ9UGM5 382 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 TBK1Q9UHD2 729 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 DKKL1Q9UK85 242 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 GPR55Q9Y2T6 319 aaPredicted RBP8.93□□□□□ -0.98
VRK3-216ENST00000599342 OR10H1Q9Y4A9 318 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 TIMM22Q9Y584 194 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 WIF1Q9Y5W5 379 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 PDZD2O15018 2839 aa8.93□□□□□ -0.98
VRK3-216ENST00000599342 INTS1Q8N201 2190 aaKnown RBP8.92□□□□□ -0.98
VRK3-216ENST00000599342 NINQ8N4C6 2090 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 ARHGAP21Q5T5U3 1957 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 TUBAL3A6NHL2 446 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 COQ9O75208 318 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 GLRA3O75311 464 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 IL18BPO95998 194 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 ANXA4P09525 319 aaPredicted RBP8.92□□□□□ -0.98
VRK3-216ENST00000599342 TMIGD3P0DMS9 266 aaPredicted RBP8.92□□□□□ -0.98
VRK3-216ENST00000599342 MYL2P10916 166 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 TACR1P25103 407 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 CTSSP25774 331 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 SOX18P35713 384 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 CORO7P57737 925 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 NAA20P61599 178 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 MRPS22P82650 360 aaKnown RBP8.92□□□□□ -0.98
VRK3-216ENST00000599342 SRYQ05066 204 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 ZNF155Q12901 538 aaPredicted RBP8.92□□□□□ -0.98
VRK3-216ENST00000599342 SLC29A2Q14542 456 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 LARP4Q71RC2 724 aaKnown RBP eCLIP8.92□□□□□ -0.98
VRK3-216ENST00000599342 PLCZ1Q86YW0 608 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 CCNYL1Q8N7R7 359 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 ZPLD1Q8TCW7 415 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 NRGNQ92686 78 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 NTNG2Q96CW9 530 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 SLC35A4Q96G79 324 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 ZFP3Q96NJ6 502 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 KCNA7Q96RP8 456 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 ADOQ96SZ5 270 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 TM9SF2Q99805 663 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 OR2B2Q9GZK3 357 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 EPB41L4BQ9H329 900 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 ACBD3Q9H3P7 528 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 FOLH1BQ9HBA9 442 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 RASSF1Q9NS23 344 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 TAS2R10Q9NYW0 307 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 DCDC2Q9UHG0 476 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 DCHS2Q6V1P9 2916 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 EXPH5Q8NEV8 1989 aa8.92□□□□□ -0.98
VRK3-216ENST00000599342 AKAP9Q99996 3911 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 A6NNC1 897 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 H3BQF6 201 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 PLOD3O60568 738 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CT45A8P0DMV1 189 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CT45A9P0DMV2 189 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CPN1P15169 458 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 DDCP20711 480 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 NTSP30990 170 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 SRD5A2P31213 254 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CPA2P48052 419 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 NCBP2P52298 156 aaKnown RBP eCLIP8.91□□□□□ -0.98
VRK3-216ENST00000599342 AGFG1P52594 562 aaKnown RBP8.91□□□□□ -0.98
VRK3-216ENST00000599342 IST1P53990 364 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 PNLIPRP2P54317 469 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 SORDQ00796 357 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 C2orf80Q0P641 193 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CEBPEQ15744 281 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CT45A2Q5DJT8 189 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CFAP157Q5JU67 520 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 SH2D4BQ5SQS7 431 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 GALNT18Q6P9A2 607 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 ZYG11AQ6WRX3 759 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 SLC44A2Q8IWA5 706 aaPredicted RBP8.91□□□□□ -0.98
VRK3-216ENST00000599342 TRIM42Q8IWZ5 723 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 WDSUB1Q8N9V3 476 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 C9orf106Q8NAJ2 232 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CHDHQ8NE62 594 aaPredicted RBP8.91□□□□□ -0.98
VRK3-216ENST00000599342 OR7G2Q8NG99 324 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 OR4K17Q8NGC6 315 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 EFHD2Q96C19 240 aaPredicted RBP8.91□□□□□ -0.98
VRK3-216ENST00000599342 VSTM2LQ96N03 204 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 SFXN2Q96NB2 322 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 TUBA1CQ9BQE3 449 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 RHOXF2Q9BQY4 288 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 SFXN3Q9BWM7 321 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 GSTO2Q9H4Y5 243 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CCM2LQ9NUG4 571 aaPredicted RBP8.91□□□□□ -0.98
VRK3-216ENST00000599342 PPP4R1LQ9P1A2 415 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 ST6GALNAC2Q9UJ37 374 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 CBLCQ9ULV8 474 aa8.91□□□□□ -0.98
VRK3-216ENST00000599342 SERTM1A2A2V5 107 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 CLCA1A8K7I4 914 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 TSPAN2O60636 221 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 NME6O75414 186 aaPredicted RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 SLITRK5O94991 958 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 JUNP05412 331 aaKnown RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 FAM153BP0C7A2 387 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 EPXP11678 715 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 TCEA1P23193 301 aaKnown RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 CHMP24386 653 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 DNASE1P24855 282 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms