RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 INTS12Q96CB8 462 aaKnown RBP17.57■□□□□ 0.4
TRAF4-216ENST00000586813 SLC35A4Q96G79 324 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 ACBD3Q9H3P7 528 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 ANKRA2Q9H9E1 313 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 PFDN4Q9NQP4 134 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 VPS29Q9UBQ0 182 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 FBXL2Q9UKC9 423 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 SH3D21A4FU49 640 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 TRIM49D1C9J1S8 452 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 REM1O75628 298 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 CT45A8P0DMV1 189 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 CT45A9P0DMV2 189 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 SRD5A2P31213 254 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 CORO7P57737 925 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 CLCQ05315 142 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 POU4F3Q15319 338 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 CT45A2Q5DJT8 189 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 AAGABQ6PD74 315 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 SCIMPQ6UWF3 145 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 CCDC116Q8IYX3 515 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 CDYL2Q8N8U2 506 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 WFDC11Q8NEX6 87 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 OR9A2Q8NGT5 310 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 DCAKDQ8WVC6 231 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 ERP27Q96DN0 273 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 ADOQ96SZ5 270 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 PIGMQ9H3S5 423 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 MCM8Q9UJA3 840 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 ZNF180Q9UJW8 692 aa17.56■□□□□ 0.4
TRAF4-216ENST00000586813 A0A1W2PPR1 153 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 POC1B-GALNT4F8VUJ3 575 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 MANBAO00462 879 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 PLOD2O00469 737 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 PCDH7O60245 1069 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 TSPAN2O60636 221 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 NME6O75414 186 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-216ENST00000586813 BCAS2O75934 225 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-216ENST00000586813 IL3P08700 152 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 HSD3B1P14060 373 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 CHMP24386 653 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 HSD3B2P26439 372 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 HSD17B3P37058 310 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 STARP49675 285 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 CLDN18P56856 261 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 CSTF3Q12996 717 aaKnown RBP17.55■□□□□ 0.4
TRAF4-216ENST00000586813 EFR3AQ14156 821 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 GRAMD2AQ8IUY3 354 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 SMPDL3BQ92485 455 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 KAT2AQ92830 837 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 DTNBP1Q96EV8 351 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 VSTM2LQ96N03 204 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 SFXN2Q96NB2 322 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 TSPYL1Q9H0U9 437 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 DKKL1Q9UK85 242 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 PACSIN3Q9UKS6 424 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 DLGAP4Q9Y2H0 992 aa17.55■□□□□ 0.4
TRAF4-216ENST00000586813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRAF4-216ENST00000586813 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 TNFSF13O75888 250 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 KRT6AP02538 564 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 KRT6BP04259 564 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 DRD2P14416 443 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 CHN1P15882 459 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 ZNF708P17019 499 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 IL12BP29460 328 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 HOXC12P31275 282 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 KRT20P35900 424 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 KRT6CP48668 564 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 PSPHP78330 225 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 RAE1P78406 368 aaKnown RBP17.54■□□□□ 0.4
TRAF4-216ENST00000586813 GAB1Q13480 694 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 RASA2Q15283 850 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 ERCC6LQ2NKX8 1250 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 OR5M10Q6IEU7 315 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 NPSR1Q6W5P4 371 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 GBP7Q8N8V2 638 aaPredicted RBP17.54■□□□□ 0.4
TRAF4-216ENST00000586813 RNF138Q8WVD3 245 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 EXOSC8Q96B26 276 aaKnown RBP17.54■□□□□ 0.4
TRAF4-216ENST00000586813 FMO2Q99518 471 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 ACPTQ9BZG2 426 aa17.54■□□□□ 0.4
TRAF4-216ENST00000586813 MRPS18CQ9Y3D5 142 aaKnown RBP17.54■□□□□ 0.4
TRAF4-216ENST00000586813 A8MXE2 369 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 B4DXG7 233 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 HCRTR2O43614 444 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 SUPT7LO94864 414 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 CD53P19397 219 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 TCEA1P23193 301 aaKnown RBP17.53■□□□□ 0.4
TRAF4-216ENST00000586813 GRK2P25098 689 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 CPOXP36551 454 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 DIO3P55073 304 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 EEF1A1P68104 462 aaKnown RBP17.53■□□□□ 0.4
TRAF4-216ENST00000586813 ZNF678Q5SXM1 525 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 TEX35Q5T0J7 233 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 EEF1A1P5Q5VTE0 462 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 GPRIN3Q6ZVF9 776 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 LARP4Q71RC2 724 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■□□□ 13
TRAF4-216ENST00000586813 KRTAP1-3Q8IUG1 177 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 SAMD14Q8IZD0 417 aaPredicted RBP17.53■□□□□ 0.4
TRAF4-216ENST00000586813 TMEM237Q96Q45 408 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 ZNF382Q96SR6 550 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms