RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.22□□□□□ -2.05
CDC27-218ENST00000575830 CNTN4Q8IWV2 1026 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 SFRP1Q8N474 314 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 ZNF564Q8TBZ8 553 aaPredicted RBP2.22□□□□□ -2.05
CDC27-218ENST00000575830 U2AF1L4Q8WU68 220 aaKnown RBP2.22□□□□□ -2.05
CDC27-218ENST00000575830 HIST1H2ACQ93077 130 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 RAB3CQ96E17 227 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 CCDC51Q96ER9 411 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 C11orf24Q96F05 449 aaPredicted RBP2.22□□□□□ -2.05
CDC27-218ENST00000575830 VMP1Q96GC9 406 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 DPH7Q9BTV6 452 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 HCAR1Q9BXC0 346 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 TRIM10Q9UDY6 481 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 NTNG1Q9Y2I2 539 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 KLF2Q9Y5W3 355 aaPredicted RBP2.22□□□□□ -2.05
CDC27-218ENST00000575830 TEX264Q9Y6I9 313 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 PTPRGP23470 1445 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 FHOD3Q2V2M9 1422 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 AKNAQ7Z591 1439 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 ZFHX4Q86UP3 3567 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 PRDM2Q13029 1718 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 SHANK3Q9BYB0 1731 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 CDK13Q14004 1512 aaKnown RBP2.22□□□□□ -2.05
CDC27-218ENST00000575830 PBRM1Q86U86 1689 aa2.22□□□□□ -2.05
CDC27-218ENST00000575830 MKI67P46013 3256 aaKnown RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 A0A1W2PRV1 198 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 TRABD2BA6NFA1 517 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 EFCAB7A8K855 629 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 HDAC3O15379 428 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 LATO43561 262 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 KINO60870 393 aaKnown RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 GOSR1O95249 250 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 SLC35E2P0CK97 266 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 ATP6V1B1P15313 513 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 UGT1A6P19224 532 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 PTPN4P29074 926 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 CTNNA1P35221 906 aaKnown RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 DRD3P35462 400 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 XCR1P46094 333 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 NSFP46459 744 aaKnown RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 CCL11P51671 97 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 SGSHP51688 502 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 SLC7A2P52569 658 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 LASP1Q14847 261 aaKnown RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 CLPPQ16740 277 aaPredicted RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 ACSF3Q4G176 576 aaPredicted RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 IFI44LQ53G44 452 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 C1QTNF12Q5T7M4 302 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 DLEU7Q6UYE1 221 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 FGD6Q6ZV73 1430 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 PRSS48Q7RTY5 328 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 APOBEC3FQ8IUX4 373 aaKnown RBP2.21□□□□□ -2.06
CDC27-218ENST00000575830 CEND1Q8N111 149 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 TMCO5AQ8N6Q1 288 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 C10orf53Q8N6V4 93 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 LINC01006Q8NI28 216 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 CASD1Q96PB1 797 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 KIR2DL4Q99706 377 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 ALG9Q9H6U8 611 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 ESM1Q9NQ30 184 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 TIGARQ9NQ88 270 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 ERVK-18Q9QC07 812 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 LHX3Q9UBR4 397 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 PRODH2Q9UF12 536 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 MIOXQ9UGB7 285 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 ZNF175Q9Y473 711 aa2.21□□□□□ -2.06
CDC27-218ENST00000575830 XIRP1Q702N8 1843 aaKnown RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 IGLV8-61A0A075B6I0 122 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 MFSD2BA6NFX1 497 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 K7ERI5 159 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 TLR4O00206 839 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 EEF2KO00418 725 aaKnown RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 BUB1O43683 1085 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 RANBP6O60518 1105 aaKnown RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 STK17BO94768 372 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 NPY2RP49146 381 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 POU3F4P49335 361 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 NT5C2P49902 561 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 NPRL3Q12980 569 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 ASAH1Q13510 395 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 PRR4Q16378 134 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 HFEQ30201 348 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 SBK1Q52WX2 424 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 TCHHL1Q5QJ38 904 aaPredicted RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 PRAMEF7Q5VXH5 474 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 DMKNQ6E0U4 476 aaPredicted RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 UNC45BQ8IWX7 931 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 FBXO16Q8IX29 292 aaPredicted RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 PRR22Q8IZ63 422 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 TMEM37Q8WXS4 190 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 FRAT1Q92837 279 aaPredicted RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 EEF2KMTQ96G04 330 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 ZIM3Q96PE6 472 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 CBWD1Q9BRT8 395 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 FAM124BQ9H5Z6 455 aaPredicted RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 PDFQ9HBH1 243 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 MID1IP1Q9NPA3 183 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 MIEF1Q9NQG6 463 aa2.2□□□□□ -2.06
CDC27-218ENST00000575830 AKAP7Q9P0M2 348 aaPredicted RBP2.2□□□□□ -2.06
CDC27-218ENST00000575830 HMG20BQ9P0W2 317 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms