RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 ZNF485Q8NCK3 441 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 OR56A1Q8NGH5 318 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 OR8D4Q8NGM9 314 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 UBASH3BQ8TF42 649 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 LRRC3BQ96PB8 259 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 TMEM246Q9BRR3 403 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 NDEL1Q9GZM8 345 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 AICDAQ9GZX7 198 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 RANGRFQ9HD47 186 aaPredicted RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 COMMD3Q9UBI1 195 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 SLC13A4Q9UKG4 626 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 NDRG2Q9UN36 371 aaKnown RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 CLCA2Q9UQC9 943 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CCDC88CQ9P219 2028 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 KIAA1549LQ6ZVL6 1849 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 A0A0B4J293 547 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 GLOD5A6NK44 160 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 HLA-DQB1P01920 261 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CLTBP09497 229 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 SLC2A2P11168 524 aaPredicted RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 HLA-DMAP28067 261 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 PTGER1P34995 402 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CD79BP40259 229 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 SLC1A3P43003 542 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 MAP2K3P46734 347 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CLCNKAP51800 687 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CDH11P55287 796 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CAV3P56539 151 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 HOXC5Q00444 222 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CDK3Q00526 305 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 MAP4K2Q12851 820 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 TMEM44Q2T9K0 475 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.82□□□□□ -1.325e-6■□□□□ 8.8
SMG1-210ENST00000565224 ZNF311Q5JNZ3 666 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CLEC12AQ5QGZ9 265 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 KIAA1161Q6NSJ0 714 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CNIH2Q6PI25 160 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 METAP1DQ6UB28 335 aaPredicted RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 PLET1Q6UQ28 207 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 RTL10Q7L3V2 364 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 PRICKLE2Q7Z3G6 844 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 GRASPQ7Z6J2 395 aaPredicted RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 ETFBKMTQ8IXQ9 262 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 ZFP41Q8N8Y5 198 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 MRPL43Q8N983 215 aaKnown RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 POGLUT1Q8NBL1 392 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 C19orf18Q8NEA5 215 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 TTLQ8NG68 377 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 PIGXQ8TBF5 258 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 RFKQ969G6 155 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 MOAP1Q96BY2 351 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 RNF31Q96EP0 1072 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 FAM46AQ96IP4 442 aaKnown RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 FYTTD1Q96QD9 318 aaKnown RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 COQ7Q99807 217 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 ARHGDIGQ99819 225 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 SOSTQ9BQB4 213 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CRISPLD2Q9H0B8 497 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 QRSL1Q9H0R6 528 aaKnown RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 SLA2Q9H6Q3 261 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 CNIH4Q9P003 139 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 ENTPD4Q9Y227 616 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 BOLA1Q9Y3E2 137 aa6.82□□□□□ -1.32
SMG1-210ENST00000565224 DNMT3AQ9Y6K1 912 aaPredicted RBP6.82□□□□□ -1.32
SMG1-210ENST00000565224 PLXND1Q9Y4D7 1925 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 IGKV1-8A0A0C4DH67 115 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 FAM25AB3EWG3 89 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 FAM25CB3EWG5 89 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 FAM25GB3EWG6 89 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 PROM1O43490 865 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 AKAP8O43823 692 aaKnown RBP6.81□□□□□ -1.32
SMG1-210ENST00000565224 HLA-DPB1P04440 258 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 GAAP10253 952 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 ACRP10323 421 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 ALPPL2P10696 532 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 GNSP15586 552 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 CPN2P22792 545 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 PTBP1P26599 531 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMG1-210ENST00000565224 APEX1P27695 318 aaKnown RBP6.81□□□□□ -1.32
SMG1-210ENST00000565224 IFNA8P32881 189 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 SOX18P35713 384 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 P2RY2P41231 377 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 PRR5P85299 388 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 PRDX1Q06830 199 aaKnown RBP6.81□□□□□ -1.32
SMG1-210ENST00000565224 ST3GAL3Q11203 375 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 MADCAM1Q13477 382 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 DSG2Q14126 1118 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 C1orf53Q5VUE5 145 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 MZT2BQ6NZ67 158 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 TMEM107Q6UX40 140 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 RRM2BQ7LG56 351 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 TRIM48Q8IWZ4 208 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 UBE2J2Q8N2K1 259 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 Q8N402 240 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 KLHL36Q8N4N3 616 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 DIO2Q92813 273 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 C16orf58Q96GQ5 468 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 ZC3HAV1LQ96H79 300 aaKnown RBP6.81□□□□□ -1.32
SMG1-210ENST00000565224 RIPOR3Q96MK2 946 aa6.81□□□□□ -1.32
SMG1-210ENST00000565224 FERD3LQ96RJ6 166 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms