RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PDGFAP04085 211 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ALPPL2P10696 532 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 MYL9P24844 172 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ERP29P30040 261 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 RPS19P39019 145 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ETV6P41212 452 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 BUD31P41223 144 aaPredicted RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 B2MP61769 119 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 HOXC5Q00444 222 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 UAP1L1Q3KQV9 507 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 FBXO46Q6PJ61 603 aaPredicted RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 PAQR6Q6TCH4 344 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 IQCHQ86VS3 1027 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 TBC1D19Q8N5T2 526 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 LINC01555Q8NAE3 123 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 OR4K5Q8NGD3 323 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ZNF707Q96C28 371 aaPredicted RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 SLC6A18Q96N87 628 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 XKR8Q9H6D3 395 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 C11orf49Q9H6J7 331 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ZC4H2Q9NQZ6 224 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 SLC23A1Q9UHI7 598 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ACAD8Q9UKU7 415 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 PCDHGB2Q9Y5G2 931 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 A0A075B6Q4 140 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 OR5K3A6NET4 321 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 CCDC85CA6NKD9 419 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 KIAA0355O15063 1070 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 NUPL2O15504 423 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 PRKYO43930 277 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 FHP07954 510 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 NTSP30990 170 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 TIE1P35590 1138 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 CSNK1G2P78368 415 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 RUNX1T1Q06455 604 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 LIPKQ5VXJ0 399 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 FAM122CQ6P4D5 195 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 SPRED2Q7Z698 418 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 COMTD1Q86VU5 262 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 C12orf76Q8N812 135 aaPredicted RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 SMG7Q92540 1137 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 C12orf66Q96MD2 445 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 AMDHD1Q96NU7 426 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 MENTQ9BUN1 341 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 FAIM2Q9BWQ8 316 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 MCOLN1Q9GZU1 580 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 TMEM245Q9H330 911 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 DDX31Q9H8H2 851 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 IMP3Q9NV31 184 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ADAM29Q9UKF5 820 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 OR1A2Q9Y585 309 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 PTPRSQ13332 1948 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 CIB4A0PJX0 185 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 LATO43561 262 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 ACP5P13686 325 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 SOX9P48436 509 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 GZMKP49863 264 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 KHKP50053 298 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 GINS1Q14691 196 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 WSCD2Q2TBF2 565 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 NANOGP1Q8N7R0 232 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 GPR151Q8TDV0 419 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 MSANTD3Q96H12 275 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 MACROD1Q9BQ69 325 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.32□□□□□ -0.76
NEIL1-202ENST00000561643 RERGLQ9H628 205 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 NT5DC2Q9H857 520 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 STUB1Q9UNE7 303 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 SSR3Q9UNL2 185 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 DNMT3AQ9Y6K1 912 aaPredicted RBP10.32□□□□□ -0.76
NEIL1-202ENST00000561643 CKAP5Q14008 2032 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 TEX51A0A1B0GUA7 166 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 A0A1W2PRQ8 180 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 CACNB4O00305 520 aaPredicted RBP10.32□□□□□ -0.76
NEIL1-202ENST00000561643 HBQ1P09105 142 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 TRAPPC2P0DI81 140 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 TRAPPC2BP0DI82 140 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 DRD2P14416 443 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 ALAS2P22557 587 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 MMP11P24347 488 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 RORCP51449 518 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 MXD1Q05195 221 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 KRT33BQ14525 404 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 LASP1Q14847 261 aaKnown RBP10.32□□□□□ -0.76
NEIL1-202ENST00000561643 GPR19Q15760 415 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 GDPGP1Q6ZNW5 385 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 USP30Q70CQ3 517 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 ZER1Q7Z7L7 766 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 PROKR2Q8NFJ6 384 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 OR8H1Q8NGG4 311 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 OR6T1Q8NGN1 323 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 RAB7BQ96AH8 199 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 LRR1Q96L50 414 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 SPATA5L1Q9BVQ7 753 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 HDAC8Q9BY41 377 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 PITHD1Q9GZP4 211 aaPredicted RBP10.32□□□□□ -0.76
NEIL1-202ENST00000561643 RACGAP1Q9H0H5 632 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 C3orf14Q9HBI5 128 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 PRSS16Q9NQE7 514 aa10.32□□□□□ -0.76
NEIL1-202ENST00000561643 DIABLOQ9NR28 239 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms