RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	SLC12A4	Q9UP95	1085 aa		10.14	□□□□□ -0.79
HNRNPC-231	ENST00000557336	MAPRE3	Q9UPY8	281 aa		10.14	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ANK3	Q12955	4377 aa	Known RBP	10.14	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ACOX3	O15254	700 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ZIC3	O60481	467 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TSPAN2	O60636	221 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CBR3	O75828	277 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	OR4F21	O95013	312 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	RCBTB2	O95199	551 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	RHOXF2B	P0C7M4	288 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	DNASE1	P24855	282 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	HOXC12	P31275	282 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	HSD17B3	P37058	310 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	LHX2	P50458	406 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	RNF144A	P50876	292 aa	Predicted RBP	10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CLDN15	P56746	228 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CORO7	P57737	925 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	B3GALT5-AS1	P59052	145 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	HMGCS1	Q01581	520 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	PLCXD2	Q0VAA5	305 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	IFT88	Q13099	833 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TOMM20	Q15388	145 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	UNC50	Q53HI1	259 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ZNF628	Q5EBL2	1059 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TTC19	Q6DKK2	380 aa	Predicted RBP	10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	NPSR1	Q6W5P4	371 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	PAGE2	Q7Z2X7	111 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TRIM42	Q8IWZ5	723 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	GOT1L1	Q8NHS2	421 aa	Predicted RBP	10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TMBIM1	Q969X1	311 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	C11orf24	Q96F05	449 aa	Predicted RBP	10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	PAFAH2	Q99487	392 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	SMR3A	Q99954	134 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	MRPL57	Q9BQC6	102 aa	Known RBP	10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	OSBPL11	Q9BXB4	747 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ELOVL6	Q9H5J4	265 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	METTL7A	Q9H8H3	244 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	BRF2	Q9HAW0	419 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	AHSP	Q9NZD4	102 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	FBXL2	Q9UKC9	423 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	MED12L	Q86YW9	2145 aa		10.13	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ROS1	P08922	2347 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	PRAMEF25	A6NGN4	478 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	FRG2C	A6NGY1	282 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	GOLGA6L10	A6NI86	522 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	OR6C70	A6NIJ9	312 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CLCA1	A8K7I4	914 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	MANBA	O00462	879 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	EEF1E1	O43324	174 aa	Known RBP	10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CDH16	O75309	829 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TNFSF13	O75888	250 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TGM6	O95932	706 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	COL6A2	P12110	1019 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CD53	P19397	219 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	GCA	P28676	217 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	OPRM1	P35372	400 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ARL1	P40616	181 aa	Predicted RBP	10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	HTR6	P50406	440 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CLDN18	P56856	261 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	RPP38	P78345	283 aa	Known RBP	10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	DEFB113	Q30KQ7	82 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	OR5M10	Q6IEU7	315 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	KIF18B	Q86Y91	864 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	GCNT2	Q8N0V5	402 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	NOA1	Q8NC60	698 aa	Known RBP	10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	RDH11	Q8TC12	318 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	ZNF675	Q8TD23	568 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	SELENOM	Q8WWX9	145 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	INTS12	Q96CB8	462 aa	Known RBP	10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	KLHL29	Q96CT2	875 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	SLC35A4	Q96G79	324 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	VSTM2L	Q96N03	204 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	BTBD9	Q96Q07	612 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	RTN4R	Q9BZR6	473 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	MRPL46	Q9H2W6	279 aa	Known RBP	10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	GALNT8	Q9NY28	637 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	VPS29	Q9UBQ0	182 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TRPS1	Q9UHF7	1281 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TMCO1	Q9UM00	188 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CFL2	Q9Y281	166 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CSPG4	Q6UVK1	2322 aa		10.12	□□□□□ -0.79
HNRNPC-231	ENST00000557336		A8MXE2	369 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	TRIM49D1	C9J1S8	452 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	PLOD2	O00469	737 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	HCRTR2	O43614	444 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	DLX3	O60479	287 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	SMIM24	O75264	130 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	OTC	P00480	354 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	RAF1	P04049	648 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	INHBA	P08476	426 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	IL3	P08700	152 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	CYP4B1	P13584	511 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	FOSL1	P15407	271 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	KRT15	P19012	456 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	PHB	P35232	272 aa		10.11	□□□□□ -0.79
HNRNPC-231	ENST00000557336	DEK	P35659	375 aa	Known RBP	10.11	□□□□□ -0.79

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