RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RPRD1BQ9NQG5 326 aaKnown RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 THEGQ9P2T0 379 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 ELF5Q9UKW6 265 aaPredicted RBP3.74□□□□□ -1.81
SCAF11-210ENST00000547654 POMT2Q9UKY4 750 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 GRID1Q9ULK0 1009 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 FZR1Q9UM11 496 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 WDR45Q9Y484 360 aa3.74□□□□□ -1.81
SCAF11-210ENST00000547654 KIF7Q2M1P5 1343 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 MARF1Q9Y4F3 1742 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 BLMP54132 1417 aaPredicted RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 TNS2Q63HR2 1409 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 A0A087WZ39 114 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 TRBV4-1A0A0J9YWV2 114 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 GOLGA6L7A0A1B0GV03 622 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SH3PXD2BA1X283 911 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 MTMR11A4FU01 709 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 METTL21EPA6NDL7 271 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 PRR23AA6NEV1 266 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SNURFLB1AK76 121 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 WRBO00258 174 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SLC1A7O00341 560 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ARPC3O15145 178 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ZSCAN12O43309 604 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CACNG3O60359 315 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SAP30O75446 220 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 DFFBO76075 338 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 STK17BO94768 372 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 GOT2P00505 430 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CALCAP01258 141 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 IGLV2-11P01706 119 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SP1P08047 785 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SLC35G4P0C7Q5 338 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 UQCRC2P22695 453 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 AADACP22760 399 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 GLRA1P23415 457 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CCT6AP40227 531 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 HTR5AP47898 357 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ABCE1P61221 599 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 RPS8P62241 208 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 NOP14P78316 857 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CSTF1Q05048 431 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 IFT88Q13099 833 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 GPR17Q13304 367 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SNTA1Q13424 505 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ZRSR1Q15695 479 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CAMK4Q16566 473 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 C10orf120Q5SQS8 335 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ATP1A1-AS1Q5TC04 95 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 PRAMEF5Q5TYX0 476 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 PRAMEF6Q5VXH4 476 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ZSCAN25Q6NSZ9 544 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF841Q6ZN19 808 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 RANBP3LQ86VV4 465 aaPredicted RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 WDR49Q8IV35 697 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 PYROXD2Q8N2H3 581 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 LRRC43Q8N309 656 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 RFLNBQ8N5W9 214 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 OR9K2Q8NGE7 335 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 OR52K1Q8NGK4 314 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SLC2A14Q8TDB8 520 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 MRPL24Q96A35 216 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 TMEM143Q96AN5 459 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 RPRD1AQ96P16 312 aaPredicted RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CASD1Q96PB1 797 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 UHRF2Q96PU4 802 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ACCSQ96QU6 501 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 TESK2Q96S53 571 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 PSD2Q9BQI7 771 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 EVA1AQ9H8M9 152 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 KCNK13Q9HB14 408 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 UTP6Q9NYH9 597 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SPATA7Q9P0W8 599 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SUN2Q9UH99 717 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF346Q9UL40 294 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CDH9Q9ULB4 789 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 RPH3ALQ9UNE2 315 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 NIP7Q9Y221 180 aaKnown RBP eCLIP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SLC6A5Q9Y345 797 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CHTOPQ9Y3Y2 248 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 WIPI2Q9Y4P8 454 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 SELENOKQ9Y6D0 94 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 RREB1Q92766 1687 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 CARMIL1Q5VZK9 1371 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 PARD3Q8TEW0 1356 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 RGPD1P0DJD0 1748 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 NUP188Q5SRE5 1749 aa3.73□□□□□ -1.81
SCAF11-210ENST00000547654 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.73□□□□□ -1.81
SCAF11-210ENST00000547654 AFF2P51816 1311 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 CGNL1Q0VF96 1302 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 RNF123Q5XPI4 1314 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 PLXNC1O60486 1568 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 PLCH2O75038 1416 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 SERTM2A0A1B0GWG4 89 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 TTC26A0AVF1 554 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ASPDHA6ND91 283 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 NKX6-3A6NJ46 265 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 ASB14A6NK59 587 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 WASHC1A8K0Z3 465 aa3.72□□□□□ -1.81
SCAF11-210ENST00000547654 MEI4A8MW99 385 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms