RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 CCND1P24385 295 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 ADRA1DP25100 572 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 CD40P25942 277 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 ARNTP27540 789 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 APOBEC3AP31941 199 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-217ENST00000537162 ITGADQ13349 1161 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 SNTA1Q13424 505 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 SPRED3Q2MJR0 410 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 PARP6Q2NL67 630 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 LRRC38Q5VT99 294 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 RAET1LQ5VY80 246 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 UGT3A1Q6NUS8 523 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 DARS2Q6PI48 645 aaKnown RBP8.29□□□□□ -1.08
CPSF7-217ENST00000537162 VN1R5Q7Z5H4 357 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 HSCBQ8IWL3 235 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 CPNE9Q8IYJ1 553 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 SYT14Q8NB59 555 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 OR56A3Q8NH54 315 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 CLDND2Q8NHS1 167 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 CCT6BQ92526 530 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 LRRC45Q96CN5 670 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 RBM18Q96H35 190 aaKnown RBP8.29□□□□□ -1.08
CPSF7-217ENST00000537162 ZNF48Q96MX3 618 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-217ENST00000537162 FN3KRPQ9HA64 309 aa8.29□□□□□ -1.08
CPSF7-217ENST00000537162 OR2M5A3KFT3 312 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 SHISA8B8ZZ34 492 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 APOC4-APOC2K7ER74 178 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 FSHBP01225 129 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 APOC2P02655 101 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 TUBBP07437 444 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 CT62P0C5K7 136 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 ALOX15P16050 662 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-217ENST00000537162 KRT15P19012 456 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 EDNRAP25101 427 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 NMBRP28336 390 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 PCGF2P35227 344 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 EIF1AXP47813 144 aaKnown RBP8.28□□□□□ -1.08
CPSF7-217ENST00000537162 MARCKSL1P49006 195 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 NRG3P56975 720 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 EIF3EP60228 445 aaKnown RBP8.28□□□□□ -1.08
CPSF7-217ENST00000537162 CRADDP78560 199 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 PLIN5Q00G26 463 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 CDH17Q12864 832 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 ADPRMQ3LIE5 342 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 UGT2A3Q6UWM9 527 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 BBS12Q6ZW61 710 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 DOK3Q7L591 496 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 NUP54Q7Z3B4 507 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 SLC46A3Q7Z3Q1 461 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 TMPRSS11BQ86T26 416 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 ZCCHC24Q8N2G6 241 aaKnown RBP8.28□□□□□ -1.08
CPSF7-217ENST00000537162 SPATA6LQ8N4H0 392 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 OTUD6BQ8N6M0 293 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 ZNF615Q8N8J6 731 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 BBOF1Q8ND07 529 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 OR2L5Q8NG80 312 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 GFM2Q969S9 779 aaKnown RBP8.28□□□□□ -1.08
CPSF7-217ENST00000537162 OMA1Q96E52 524 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 PPP1R2P1Q96PQ5 205 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 C1QTNF6Q9BXI9 259 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 LYRM4Q9HD34 91 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 MID2Q9UJV3 735 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 MGAT4BQ9UQ53 548 aa8.28□□□□□ -1.08
CPSF7-217ENST00000537162 BTNL10A8MVZ5 291 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 H3BMM5 538 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 RTCAO00442 366 aaKnown RBP8.27□□□□□ -1.09
CPSF7-217ENST00000537162 PPP1R3DO95685 299 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 OPN1LWP04000 364 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 IFNGR1P15260 489 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 HK1P19367 917 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 GRK2P25098 689 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 ZP4Q12836 540 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 BAMBIQ13145 260 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 ZNF628Q5EBL2 1059 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 HLA-DQA1Q5Y7H0 255 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 TMEM108Q6UXF1 575 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 GALNT10Q86SR1 603 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 LUZP1Q86V48 1076 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 BCL6BQ8N143 479 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-217ENST00000537162 MPP5Q8N3R9 675 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 OR51F2Q8NH61 342 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 CD200R1Q8TD46 325 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 RIT1Q92963 219 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 MUCL1Q96DR8 90 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 F2RL3Q96RI0 385 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 AIF1LQ9BQI0 150 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 REXO4Q9GZR2 422 aaKnown RBP8.27□□□□□ -1.09
CPSF7-217ENST00000537162 ANKZF1Q9H8Y5 726 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 COPS7BQ9H9Q2 264 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-217ENST00000537162 PELI2Q9HAT8 420 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 TREX1Q9NSU2 369 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 TREM2Q9NZC2 230 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 PRSS50Q9UI38 385 aa8.27□□□□□ -1.09
CPSF7-217ENST00000537162 HEATR1Q9H583 2144 aaKnown RBP8.27□□□□□ -1.09
CPSF7-217ENST00000537162 A0A088AWK7 358 aa8.26□□□□□ -1.09
CPSF7-217ENST00000537162 MACROD2A1Z1Q3 448 aa8.26□□□□□ -1.09
CPSF7-217ENST00000537162 LRRC10BA6NIK2 292 aa8.26□□□□□ -1.09
CPSF7-217ENST00000537162 M0R1B8 84 aa8.26□□□□□ -1.09
CPSF7-217ENST00000537162 EIF1AYO14602 144 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms