RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 FGF19O95750 216 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 GLP2RO95838 553 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 RB1P06400 928 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 NPSP0C0P6 89 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR8U8P0C7N1 319 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF865P0CJ78 1059 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 PTHLHP12272 177 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 UGT2B7P16662 529 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SFNP31947 248 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 GNALP38405 381 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 BDKRB1P46663 353 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CLCN3P51790 818 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CXCR4P61073 352 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 JAG1P78504 1218 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CDK6Q00534 326 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ELAVL2Q12926 359 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 SURF2Q15527 256 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR8G1Q15617 311 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 DUOXA2Q1HG44 320 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 RFTN2Q52LD8 501 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF628Q5EBL2 1059 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMEM255AQ5JRV8 349 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SPANXN4Q5MJ08 99 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FCRLBQ6BAA4 426 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR52W1Q6IF63 320 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MBOAT1Q6ZNC8 495 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 RNF165Q6ZSG1 346 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LRRTM1Q86UE6 522 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 LRRTM4Q86VH4 590 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 VSIG10LQ86VR7 867 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PDZD9Q8IXQ8 264 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMEM192Q8IY95 271 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 HDDC3Q8N4P3 179 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CHST13Q8NET6 341 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR5T2Q8NGG2 359 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 METTL6Q8TCB7 284 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SCMH1Q96GD3 660 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PYURFQ96I23 114 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZFP3Q96NJ6 502 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 EGFL8Q99944 293 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ELOVL4Q9GZR5 314 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 NIF3L1Q9GZT8 377 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR10A4Q9H209 315 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MINDY3Q9H8M7 445 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 UCK1Q9HA47 277 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MEPEQ9NQ76 525 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 DCAF13Q9NV06 445 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 AIG1Q9NVV5 245 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 VSX1Q9NZR4 365 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 EXTL2Q9UBQ6 330 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ING1Q9UK53 422 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ACSL6Q9UKU0 697 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 KCNK7Q9Y2U2 307 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 KIAA1671Q9BY89 1806 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CCDC88CQ9P219 2028 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 A0A0U1RQF3 1178 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 hCG_1809904A0A1W2PP81 198 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 A0A1W2PR64 198 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 A0A1W2PRV1 198 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CD8B2A6NJW9 211 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PRR33A8MZF0 331 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ANHXE9PGG2 379 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PROM1O43490 865 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ENTPD6O75354 484 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CDC123O75794 336 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ANXA9O76027 345 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 RECQL4O94761 1208 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 STBD1O95210 358 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CNOT4O95628 575 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 C6orf47O95873 294 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TCRBP04435 133 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 IFNA4P05014 189 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 RPLP2P05387 115 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 NFICP08651 508 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR56A5P0C7T3 313 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMIGD3P0DMS9 266 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 CD8BP10966 210 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ZNF35P13682 527 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 IGFBP4P22692 258 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PSMA1P25786 263 aaKnown RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 SLC6A1P30531 599 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 CSRP3P50461 194 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ECH1Q13011 328 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 HTR4Q13639 388 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 GAMTQ14353 236 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 RBBP7Q16576 425 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 MAPKAPK3Q16644 382 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SLC10A6Q3KNW5 377 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PLEKHN1Q494U1 663 aaPredicted RBP3.51□□□□□ -1.85
MCF2-210ENST00000536274 ATP13A5Q4VNC0 1218 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 EFCAB12Q6NXP0 572 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TMEM71Q6P5X7 295 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 TRIM46Q7Z4K8 759 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 ISCA2Q86U28 154 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 PPP1R3BQ86XI6 285 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 SLC30A8Q8IWU4 369 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 FAM181AQ8N9Y4 354 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 REPS2Q8NFH8 660 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR4F6Q8NGB9 312 aa3.51□□□□□ -1.85
MCF2-210ENST00000536274 OR52B6Q8NGF0 335 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms