RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 BATF2Q8N1L9 274 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 BEST3Q8N1M1 668 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 PAPD5Q8NDF8 572 aaKnown RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 CSNK2A3Q8NEV1 391 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 ARRDC2Q8TBH0 407 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 RPL36ALQ969Q0 106 aaKnown RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 RAB7BQ96AH8 199 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 TMEM18Q96B42 140 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 DTNBP1Q96EV8 351 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 GRAMD2BQ96HH9 432 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 CDKN2AIPNLQ96HQ2 116 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 PANX3Q96QZ0 392 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 CITED1Q99966 193 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 CARD6Q9BX69 1037 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 SNX25Q9H3E2 840 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 TCEAL2Q9H3H9 227 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 NXF3Q9H4D5 531 aaKnown RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 METTL17Q9H7H0 456 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 SEBOXQ9HB31 216 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 GPN1Q9HCN4 374 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 MMP25Q9NPA2 562 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 SPAG4Q9NPE6 437 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 FANCFQ9NPI8 374 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 FBXO8Q9NRD0 319 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 FAM118AQ9NWS6 357 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 SOHLH2Q9NX45 425 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 BARHL2Q9NY43 387 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 TUBA8Q9NY65 449 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 DNPEPQ9ULA0 475 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 EXOC6BQ9Y2D4 811 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 WDR37Q9Y2I8 494 aa2.76□□□□□ -1.97
CSDE1-209ENST00000525132 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-209ENST00000525132 NYNRINQ9P2P1 1898 aaKnown RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 DUXAA6NLW8 204 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 KCNU1A8MYU2 1149 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 B4DGG1 531 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 ZNF814B7Z6K7 855 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 LMO7DNF2Z398 122 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 UBXN8O00124 270 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 HS3ST1O14792 307 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 POLR1CO15160 346 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 SPINT2O43291 252 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 SSX5O60225 188 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 PRAF2O60831 178 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 PALMO75781 387 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 RNF8O76064 485 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 PLGP00747 810 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 OPN1MWP04001 364 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 LCATP04180 440 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 CSN3P07498 182 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 MYZAPP0CAP1 466 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 TPBGLP0DKB5 382 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 OPN1MW2P0DN77 364 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 OPN1MW3P0DN78 364 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 SAGP10523 405 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 ABOP16442 354 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 PEX19P40855 299 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 APOBEC1P41238 236 aaKnown RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 NR4A2P43354 598 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 MAGEB1P43366 347 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 RAD23BP54727 409 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 MTCP1P56278 107 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 GSDMDP57764 484 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 ACTR1AP61163 376 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 RPS13P62277 151 aaKnown RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 DLK1P80370 383 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 EGR4Q05215 589 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 ELP6Q0PNE2 266 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 OASLQ15646 514 aaKnown RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 SRSF7Q16629 238 aaKnown RBP eCLIP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 LRRC38Q5VT99 294 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 RAET1GQ6H3X3 334 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 B3GNT6Q6ZMB0 384 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 DNM1P46Q6ZS02 220 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 TAF8Q7Z7C8 310 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 DDIASQ8IXT1 998 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 KLHDC8AQ8IYD2 350 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 CFAP206Q8IYR0 622 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 PYROXD2Q8N2H3 581 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 RPRMLQ8N4K4 120 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 TEX45Q8NA69 505 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 SLC38A9Q8NBW4 561 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 BICD2Q8TD16 824 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 GPT2Q8TD30 523 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 SORCS1Q8WY21 1168 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 FIG4Q92562 907 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 THRSPQ92748 146 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 PHF21AQ96BD5 680 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 MOB3AQ96BX8 217 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 DTD2Q96FN9 168 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 CFAP36Q96G28 342 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 ERP44Q9BS26 406 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 ZNF577Q9BSK1 485 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 TCHPQ9BT92 498 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 DDX47Q9H0S4 455 aaKnown RBP2.75□□□□□ -1.97
CSDE1-209ENST00000525132 RAB17Q9H0T7 212 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 FAM234AQ9H0X4 552 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 DPAGT1Q9H3H5 408 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 RIBC2Q9H4K1 309 aa2.75□□□□□ -1.97
CSDE1-209ENST00000525132 CDH20Q9HBT6 801 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms