RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 BBOF1Q8ND07 529 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ELP5Q8TE02 316 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ASZ1Q8WWH4 475 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 LPGAT1Q92604 370 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 TFGQ92734 400 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 SNF8Q96H20 258 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 TGM7Q96PF1 710 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 EBNA1BP2Q99848 306 aaKnown RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ERP44Q9BS26 406 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 NAT9Q9BTE0 207 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 CARD6Q9BX69 1037 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 P2RY12Q9H244 342 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 OR52A5Q9H2C5 316 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 KIR3DX1Q9H7L2 352 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ASCL3Q9NQ33 180 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 KRT84Q9NSB2 600 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 OGFRQ9NZT2 677 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 SLC24A2Q9UI40 661 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 GNPTGQ9UJJ9 305 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 SNX24Q9Y343 169 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 FAM169AQ9Y6X4 670 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 USP24Q9UPU5 2620 aa6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ANKRD11Q6UB99 2663 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-208ENST00000520228 ASPMQ8IZT6 3477 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 FREM2Q5SZK8 3169 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 GOLGA4Q13439 2230 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 SLC5A10A0PJK1 596 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 OR5K3A6NET4 321 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 CDRT15L2A8MXV6 281 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 H3BMM5 538 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 KIF2AO00139 706 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 TOX3O15405 576 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 KCNAB3O43448 404 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 RAD51CO43502 376 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 PTP4A3O75365 173 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 BANF1O75531 89 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 TTC4O95801 387 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 MLYCDO95822 493 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 C9P02748 559 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 FGF3P11487 239 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 CCL4P13236 92 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ITIH1P19827 911 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 OGNP20774 298 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 RPS3P23396 243 aaKnown RBP eCLIP6.49□□□□□ -1.372e-6■■■□□ 17.7
SDCBP-208ENST00000520228 ACADLP28330 430 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ELK3P41970 407 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 CDKN2AP42771 156 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 RPL21P46778 160 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 LEPRP48357 1165 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 CSE1LP55060 971 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 F2RL1P55085 397 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ADARP55265 1226 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 GFERP55789 205 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 CALCOCO2Q13137 446 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 PRKG2Q13237 762 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 CRYMQ14894 314 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 WHAMMP3Q1A5X7 153 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 HSP90AA5PQ58FG0 334 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 IRGCQ6NXR0 463 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 FAM92BQ6ZTR7 304 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 CENPUQ71F23 418 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 OTOAQ7RTW8 1153 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ARHGAP22Q7Z5H3 698 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 FOXRED2Q8IWF2 684 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 KRT222Q8N1A0 295 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ACVR1CQ8NER5 493 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 OR4E2Q8NGC2 313 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 GSDMBQ8TAX9 411 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 LCN9Q8WX39 176 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 LRRC39Q96DD0 335 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 LYZL4Q96KX0 146 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 C9orf72Q96LT7 481 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 BIRC8Q96P09 236 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 PANX3Q96QZ0 392 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 TREX2Q9BQ50 279 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 SPRY4Q9C004 299 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 RAB33BQ9H082 229 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 DPH5Q9H2P9 285 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 SRMSQ9H3Y6 488 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 MMP25Q9NPA2 562 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 HINT3Q9NQE9 182 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 INTS10Q9NVR2 710 aaKnown RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 HRASLS2Q9NWW9 162 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 EPHA6Q9UF33 1036 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ERVK-11Q9UQG0 969 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ASF1AQ9Y294 204 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 KNTC1P50748 2209 aa6.49□□□□□ -1.37
SDCBP-208ENST00000520228 MN1Q10571 1320 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-208ENST00000520228 ANKRD36A6QL64 1941 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 APC2O95996 2303 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 A0A087WV48 116 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 EFCAB7A8K855 629 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 E5RI56 91 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 NVLO15381 856 aaKnown RBP6.48□□□□□ -1.37
SDCBP-208ENST00000520228 GPC4O75487 556 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 SERPINI2O75830 405 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 SLCO2B1O94956 709 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 RPN2P04844 631 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 NGFRP08138 427 aa6.48□□□□□ -1.37
SDCBP-208ENST00000520228 ANKRD34CP0C6C1 535 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms