RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ESAMQ96AP7 390 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 RMND5BQ96G75 393 aaPredicted RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 CAPZA3Q96KX2 299 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 EGFL8Q99944 293 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 ALOXE3Q9BYJ1 711 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 REXO4Q9GZR2 422 aaKnown RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 PROK2Q9HC23 129 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 SH2D2AQ9NP31 389 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 PPANQ9NQ55 473 aaKnown RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 ZNF490Q9ULM2 529 aaPredicted RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 MRPS33Q9Y291 106 aaKnown RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 ABCA1O95477 2261 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 TRGV5A0A0B4J1U4 118 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 A6NNC1 897 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 F2RL2O00254 374 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 PGRMC1O00264 195 aaKnown RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 TAPBPO15533 448 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 FGF17O60258 216 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 TRIM13O60858 407 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 CTNSO60931 367 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 SH3BGRLO75368 114 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 PIAS1O75925 651 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 TTC4O95801 387 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 GNAZP19086 355 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 EPORP19235 508 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 BMP5P22003 454 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 DNASE1P24855 282 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 PEX2P28328 305 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 ELK3P41970 407 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 TRPC1P48995 793 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 MTTPP55157 894 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 CDKL1Q00532 357 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 ASPHQ12797 758 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 STX4Q12846 297 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 DUSP8Q13202 625 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 RIN1Q13671 783 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 ZNF791Q3KP31 576 aaPredicted RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 WLSQ5T9L3 541 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 RIPPLY2Q5TAB7 128 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 STEAP4Q687X5 459 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 TRIM40Q6P9F5 258 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 PAMR1Q6UXH9 720 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 ZC3HC1Q86WB0 502 aaKnown RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 OR4N5Q8IXE1 308 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 ULK2Q8IYT8 1036 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 SPATA6LQ8N4H0 392 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 MORN4Q8NDC4 146 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 TNIP2Q8NFZ5 429 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 ZNF721Q8TF20 911 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 DAZLQ92904 295 aaKnown RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 ANKRD9Q96BM1 317 aaPredicted RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 SARAFQ96BY9 339 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 RHBDF1Q96CC6 855 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 SGCZQ96LD1 299 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 RUNDC3BQ96NL0 473 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 F2RL3Q96RI0 385 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 SERINC2Q96SA4 455 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 MAPKAP1Q9BPZ7 522 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 SORBS1Q9BX66 1292 aaKnown RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 DDX47Q9H0S4 455 aaKnown RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 EXO5Q9H790 373 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 COPS7BQ9H9Q2 264 aaPredicted RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 ASIC3Q9UHC3 531 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 CORO1CQ9ULV4 474 aaPredicted RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.08□□□□□ -1.44
COPS4-209ENST00000511653 PCNX3Q9H6A9 2034 aa6.08□□□□□ -1.44
COPS4-209ENST00000511653 A0A1W2PPR1 153 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 PRSS29PA6NIE9 313 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 SLC16A6O15403 523 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 HCN1O60741 890 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 PRKRAO75569 313 aaKnown RBP6.07□□□□□ -1.44
COPS4-209ENST00000511653 WISP3O95389 354 aaPredicted RBP6.07□□□□□ -1.44
COPS4-209ENST00000511653 GASTP01350 101 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 IGKV3-11P04433 115 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 P04436 131 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 KITP10721 976 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 TNNI3P19429 210 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 IVDP26440 423 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 CFPP27918 469 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 HSPA7P48741 367 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 FNTAP49354 379 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 HNMTP50135 292 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 ASCL1P50553 236 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 DGKQP52824 942 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 DOC2AQ14183 400 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 SLC10A1Q14973 349 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 FASTKD3Q14CZ7 662 aaKnown RBP6.07□□□□□ -1.44
COPS4-209ENST00000511653 PPP1R7Q15435 360 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 TGFBIQ15582 683 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 ACSF3Q4G176 576 aaPredicted RBP6.07□□□□□ -1.44
COPS4-209ENST00000511653 GAGE13Q4V321 117 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 OPN5Q6U736 354 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 FRA10AC1Q70Z53 315 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 ADAMTSL2Q86TH1 951 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 LRRC25Q8N386 305 aaPredicted RBP6.07□□□□□ -1.44
COPS4-209ENST00000511653 RNF175Q8N4F7 328 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 MYRIPQ8NFW9 859 aa6.07□□□□□ -1.44
COPS4-209ENST00000511653 TTLQ8NG68 377 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms