RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ATP6V1E2Q96A05 226 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 LRRC46Q96FV0 321 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 NEUROD4Q9HD90 331 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 BEX4Q9NWD9 120 aaPredicted RBP14.4□□□□□ -0.1
RAB40C-202ENST00000509637 TAS2R10Q9NYW0 307 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 XPR1Q9UBH6 696 aa14.4□□□□□ -0.1
RAB40C-202ENST00000509637 CCDC189A1A4V9 331 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 FRG2CA6NGY1 282 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 STX16-NPEPL1H3BU86 382 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 STX16O14662 325 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 CTIFO43310 598 aaKnown RBP14.39□□□□□ -0.11
RAB40C-202ENST00000509637 ERN1O75460 977 aaKnown RBP14.39□□□□□ -0.11
RAB40C-202ENST00000509637 REM1O75628 298 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 OR4F21O95013 312 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 CGAP01215 116 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 KRT15P19012 456 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 CSNK2A2P19784 350 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-202ENST00000509637 KIR2DL2P43627 348 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-202ENST00000509637 SNTA1Q13424 505 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 SF3B4Q15427 424 aaKnown RBP eCLIP14.39□□□□□ -0.115e-9■■■■■ 30.3
RAB40C-202ENST00000509637 GGTA1PQ4G0N0 100 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 METTL2BQ6P1Q9 378 aaKnown RBP14.39□□□□□ -0.11
RAB40C-202ENST00000509637 CCDC116Q8IYX3 515 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 SMPDL3BQ92485 455 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 SLC35A4Q96G79 324 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 VSTM2LQ96N03 204 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 ADOQ96SZ5 270 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 TM9SF2Q99805 663 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 KLHL28Q9NXS3 571 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 KLRF1Q9NZS2 232 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 TRPS1Q9UHF7 1281 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 DSCAMO60469 2012 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 JMJD1CQ15652 2540 aa14.39□□□□□ -0.11
RAB40C-202ENST00000509637 OR6C70A6NIJ9 312 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 ACOX3O15254 700 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 SRD5A2P31213 254 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 HTR6P50406 440 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 SERPINB8P50452 374 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 RPP38P78345 283 aaKnown RBP14.38□□□□□ -0.11
RAB40C-202ENST00000509637 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-202ENST00000509637 CCDC91Q7Z6B0 441 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 OR5M1Q8NGP8 315 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 OR9A2Q8NGT5 310 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 IGFBPL1Q8WX77 278 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 KLHL29Q96CT2 875 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 COX4I2Q96KJ9 171 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 COL21A1Q96P44 957 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 BTBD9Q96Q07 612 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 FUT8Q9BYC5 575 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 OPN3Q9H1Y3 402 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-202ENST00000509637 ACSS3Q9H6R3 686 aa14.38□□□□□ -0.11
RAB40C-202ENST00000509637 USF3Q68DE3 2245 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 TLN2Q9Y4G6 2542 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 TRIM64A6NGJ6 449 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 TRIM64BA6NI03 449 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 A8MT66 165 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 H7C1Q1 480 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 HEXAP06865 529 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 GRK2P25098 689 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ADSLP30566 484 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-202ENST00000509637 DEKP35659 375 aaKnown RBP14.37□□□□□ -0.11
RAB40C-202ENST00000509637 HSD17B3P37058 310 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ARL1P40616 181 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-202ENST00000509637 CPA2P48052 419 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ALDH9A1P49189 494 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 CAV1Q03135 178 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 IFT88Q13099 833 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 UNC50Q53HI1 259 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 Q5PR19 223 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 SHEQ5VZ18 495 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ENPP6Q6UWR7 440 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ZNF550Q7Z398 422 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 IFNEQ86WN2 208 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 FADS6Q8N9I5 356 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ZNF675Q8TD23 568 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 SELENOMQ8WWX9 145 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ZNF592Q92610 1267 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 EFHD2Q96C19 240 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-202ENST00000509637 C11orf24Q96F05 449 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ZFP3Q96NJ6 502 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 LRRC1Q9BTT6 524 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 AHSPQ9NZD4 102 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 PACSIN3Q9UKS6 424 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 EDARQ9UNE0 448 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 DLGAP4Q9Y2H0 992 aa14.37□□□□□ -0.11
RAB40C-202ENST00000509637 UTP11Q9Y3A2 253 aaKnown RBP14.37□□□□□ -0.11
RAB40C-202ENST00000509637 MRPS18CQ9Y3D5 142 aaKnown RBP14.37□□□□□ -0.11
RAB40C-202ENST00000509637 ZANQ9Y493 2812 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 GOLGA6L10A6NI86 522 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 MANBAO00462 879 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 MSTNO14793 375 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 CDH16O75309 829 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 GOSR1O95249 250 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 IL3P08700 152 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 RBP1P09455 135 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 PSG6Q00889 435 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 GUSBP1Q15486 140 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 KLC3Q6P597 504 aa14.36□□□□□ -0.11
RAB40C-202ENST00000509637 PAGE2Q7Z2X7 111 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms