RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 EN2P19622 333 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DDX6P26196 483 aaKnown RBP eCLIP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 NTSP30990 170 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CEACAM8P31997 349 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 BMI1P35226 326 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MNDAP41218 407 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ALDH3A2P51648 485 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ADPRHP54922 357 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DIO3P55073 304 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RPS24P62847 133 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SCN1BQ07699 218 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 EIF4EBP2Q13542 120 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DSG2Q14126 1118 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 GFOD2Q3B7J2 385 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PAN3Q58A45 887 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 IDNKQ5T6J7 187 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 AFTPHQ6ULP2 937 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 THSD4Q6ZMP0 1018 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 HFE2Q6ZVN8 426 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF767PQ75MW2 155 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC46A3Q7Z3Q1 461 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 LHFPL3Q86UP9 236 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 LAPTM4BQ86VI4 370 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 IQCHQ86VS3 1027 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RDH11Q8TC12 318 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DOK4Q8TEW6 326 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DCAKDQ8WVC6 231 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM40Q8WWA1 233 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 FOXRED1Q96CU9 486 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MRPS24Q96EL2 167 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MS4A3Q96HJ5 214 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SFXN2Q96NB2 322 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MESP1Q9BRJ9 268 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 WRAP53Q9BUR4 548 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MIXL1Q9H2W2 232 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 GSX1Q9H4S2 264 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MINDY3Q9H8M7 445 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 KRCC1Q9NPI7 259 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SPG21Q9NZD8 308 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 FBXW2Q9UKT8 454 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZDHHC8Q9ULC8 765 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MGAT4AQ9UM21 535 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ABCG2Q9UNQ0 655 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CNTN6Q9UQ52 1028 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RAI2Q9Y5P3 530 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PTGDR2Q9Y5Y4 395 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SPIN1Q9Y657 262 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CLCA3PQ9Y6N3 262 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 NOTCH3Q9UM47 2321 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 VCANP13611 3396 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 IGLV3-22A0A075B6J6 115 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 LRRC14BA6NHZ5 514 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 WASH4PA8MWX3 477 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 H3BM21 787 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 BLOC1S5-TXNDC5H3BN57 136 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SOCS2O14508 198 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 FMO6PO60774 539 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CTNSO60931 367 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 DUSP11O75319 330 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 GJB3O75712 270 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ATG12O94817 140 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PRAMEF1O95521 474 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TGFB1P01137 390 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 IGF2P01344 180 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CRYABP02511 175 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MMP3P08254 477 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 GIMD1P0DJR0 217 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 UNGP13051 313 aaPredicted RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF44P15621 663 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 AOC1P19801 751 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 IFNGR2P38484 337 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 STAT5AP42229 794 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 GSK3BP49841 420 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 UFM1P61960 85 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SNRPD2P62316 118 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SHC2P98077 582 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TLE2Q04725 743 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ELP6Q0PNE2 266 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 LCP2Q13094 533 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MRPL49Q13405 166 aaKnown RBP3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 TYSND1Q2T9J0 566 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC10A6Q3KNW5 377 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RAB6CQ53S08 254 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 C9orf57Q5W0N0 161 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ABHD15Q6UXT9 468 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RPTNQ6XPR3 784 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OTOP2Q7RTS6 562 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MRGPRGQ86SM5 289 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 PLCZ1Q86YW0 608 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CPOQ8IVL8 374 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 CFAP206Q8IYR0 622 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC44A3Q8N4M1 653 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF615Q8N8J6 731 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OR7G3Q8NG95 312 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OR10H4Q8NGA5 316 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 OR1N1Q8NGS0 311 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 MOSPD2Q8NHP6 518 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC35B2Q8TB61 432 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 SUSD6Q92537 303 aa3.48□□□□□ -1.85
PCDH11X-208ENST00000504220 RBPMSQ93062 196 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms