RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DMRTA2Q96SC8 542 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 ITPAQ9BY32 194 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.16
NUP50-219ENST00000497960 RUBCNLQ9H714 662 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 PROK2Q9HC23 129 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 NPHS2Q9NP85 383 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 CHST11Q9NPF2 352 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 MIEF1Q9NQG6 463 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 FGFR1OP2Q9NVK5 253 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 COQ3Q9NZJ6 369 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 NOP53Q9NZM5 478 aaKnown RBP14.08□□□□□ -0.16
NUP50-219ENST00000497960 EIF3LQ9Y262 564 aaKnown RBP14.08□□□□□ -0.16
NUP50-219ENST00000497960 DTX4Q9Y2E6 619 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 NCOA6Q14686 2063 aaPredicted RBP14.07□□□□□ -0.16
NUP50-219ENST00000497960 TRGV5A0A0B4J1U4 118 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 A0A1B0GVC2 190 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 AQP7O14520 342 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ADAM10O14672 748 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ACOX3O15254 700 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 POLR3GO15318 223 aaPredicted RBP14.07□□□□□ -0.16
NUP50-219ENST00000497960 HNRNPRO43390 633 aaKnown RBP14.07□□□□□ -0.16
NUP50-219ENST00000497960 SUSD5O60279 629 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 HCN1O60741 890 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 SNX4O95219 450 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 LRATO95237 230 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 BCKDHAP12694 445 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ASMTP46597 345 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 MASP1P48740 699 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 GYS2P54840 703 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 AQP5P55064 265 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 PLCXD2Q0VAA5 305 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 NNATQ16517 81 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ZNF630Q2M218 657 aaPredicted RBP14.07□□□□□ -0.16
NUP50-219ENST00000497960 SMU1Q2TAY7 513 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 GXYLT1Q4G148 440 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ZNF628Q5EBL2 1059 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 IL23RQ5VWK5 629 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 NCCRP1Q6ZVX7 275 aaPredicted RBP14.07□□□□□ -0.16
NUP50-219ENST00000497960 IKBIPQ70UQ0 350 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 PACS2Q86VP3 889 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 LRRC34Q8IZ02 419 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 FAM9CQ8IZT9 166 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 OR9A2Q8NGT5 310 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 KAT2AQ92830 837 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ZNF597Q96LX8 424 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ZNF703Q9H7S9 590 aaPredicted RBP14.07□□□□□ -0.16
NUP50-219ENST00000497960 QPCTLQ9NXS2 382 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 LIPGQ9Y5X9 500 aa14.07□□□□□ -0.16
NUP50-219ENST00000497960 LRRC3CA6NJW4 275 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 PPM1BO75688 479 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 TGDSO95455 350 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 CLDN14O95500 239 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 ABCB1P08183 1280 aaPredicted RBP14.06□□□□□ -0.16
NUP50-219ENST00000497960 CELA3AP09093 270 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 PRPS2P11908 318 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 DRD5P21918 477 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 TACR1P25103 407 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 HPCAL1P37235 193 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 PPICP45877 212 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 EMDP50402 254 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 EMX2Q04743 252 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 DUSP8Q13202 625 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 CEBPEQ15744 281 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 FAM71E1Q6IPT2 247 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 NUP54Q7Z3B4 507 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 TICAM1Q8IUC6 712 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 GFM2Q969S9 779 aaKnown RBP14.06□□□□□ -0.16
NUP50-219ENST00000497960 SARAFQ96BY9 339 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 SDCCAG3Q96C92 435 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 OMA1Q96E52 524 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 MAELQ96JY0 434 aaKnown RBP14.06□□□□□ -0.16
NUP50-219ENST00000497960 RILPQ96NA2 401 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 SIKE1Q9BRV8 207 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 ANGPTL4Q9BY76 406 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 METTL7AQ9H8H3 244 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 DCTN4Q9UJW0 460 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 HRH3Q9Y5N1 445 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 CACNA1CQ13936 2221 aa14.06□□□□□ -0.16
NUP50-219ENST00000497960 CENPEQ02224 2701 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 FRG2CA6NGY1 282 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 FIGNL2A6NMB9 653 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 ZNF195O14628 629 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 AKAP10O43572 662 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 PLOD3O60568 738 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 TRIM3O75382 744 aaPredicted RBP14.05□□□□□ -0.16
NUP50-219ENST00000497960 RFPL3SP0C7P2 107 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 GDF1P27539 372 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 GRNP28799 593 aaKnown RBP14.05□□□□□ -0.16
NUP50-219ENST00000497960 NTSP30990 170 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 SOX18P35713 384 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 CASP3P42574 277 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 NCBP2P52298 156 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP50-219ENST00000497960 GNGT1P63211 74 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 PTGR1Q14914 329 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 BICRALQ6AI39 1079 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 OGFOD2Q6N063 350 aa14.05□□□□□ -0.16
NUP50-219ENST00000497960 ZNF585AQ6P3V2 769 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms