RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 SGO1Q5FBB7 561 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 CCNYL2Q5T2Q4 361 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 SLC48A1Q6P1K1 146 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 METTL2BQ6P1Q9 378 aaKnown RBP8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 KLC3Q6P597 504 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 PLEKHM3Q6ZWE6 761 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 PAGE2Q7Z2X7 111 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 NUP54Q7Z3B4 507 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 COMMD6Q7Z4G1 85 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 PTGR2Q8N8N7 351 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 SPATA4Q8NEY3 305 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 ADCY4Q8NFM4 1077 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 OR14L1PQ8NHC6 308 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 RDH11Q8TC12 318 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 TMEM171Q8WVE6 324 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 ROBO4Q8WZ75 1007 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 ATP6V1E2Q96A05 226 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 LCORQ96JN0 433 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 WFIKKN1Q96NZ8 548 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 BRINP2Q9C0B6 783 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 LRTM1Q9HBL6 345 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 ZNF701Q9NV72 531 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 TAS2R10Q9NYW0 307 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 KLRF1Q9NZS2 232 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 NDRG3Q9UGV2 375 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 BCAP29Q9UHQ4 241 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 ZNF639Q9UID6 485 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 PACSIN3Q9UKS6 424 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 EXO1Q9UQ84 846 aaKnown RBP8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 CFL2Q9Y281 166 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 PCDHA9Q9Y5H5 950 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 USF3Q68DE3 2245 aa8.53□□□□□ -1.04
SMARCE1-210ENST00000481231 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 A0A1W2PNV4 684 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 GOLGA6L10A6NI86 522 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 A8MXE2 369 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PLOD2O00469 737 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 TO15178 435 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 ERAL1O75616 437 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 CBR3O75828 277 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 TNFSF13O75888 250 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 TGM6O95932 706 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PAX1P15863 534 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PCSK2P16519 638 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 CSNK2A2P19784 350 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 LOXP28300 417 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 DEKP35659 375 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 EMDP50402 254 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 SERPINB8P50452 374 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 CLDN18P56856 261 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 HMGCS1Q01581 520 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 CAV1Q03135 178 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 C2orf54Q08AI8 447 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 GALNT1Q10472 559 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 IFT88Q13099 833 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 LTB4RQ15722 352 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 TECRLQ5HYJ1 363 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 C6orf52Q5T4I8 152 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 FAM180BQ6P0A1 224 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 ENPP6Q6UWR7 440 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 IFNEQ86WN2 208 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PLCZ1Q86YW0 608 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 GRAMD2AQ8IUY3 354 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PLD6Q8N2A8 252 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 METTL4Q8N3J2 472 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 OR52R1Q8NGF1 315 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 TMBIM1Q969X1 311 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 CTHRC1Q96CG8 243 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PHF21BQ96EK2 531 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 SFXN2Q96NB2 322 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 NSUN5Q96P11 429 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 COL21A1Q96P44 957 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 ACBD3Q9H3P7 528 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PIGMQ9H3S5 423 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 CXorf56Q9H5V9 222 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 ZBTB26Q9HCK0 441 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 AHSPQ9NZD4 102 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 FBXL2Q9UKC9 423 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PCTPQ9UKL6 214 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 PLLPQ9Y342 182 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 CR1P17927 2039 aa8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 RAI1Q7Z5J4 1906 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-210ENST00000481231 C1orf226A1L170 272 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 FRG2CA6NGY1 282 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 OR6C70A6NIJ9 312 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 B4DXG7 233 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 MSTNO14793 375 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 GPRIN2O60269 458 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 ZIC3O60481 467 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 GUCY1B2O75343 617 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 NME6O75414 186 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 ZNF708P17019 499 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 DRD5P21918 477 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 CRYGSP22914 178 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 TCEA1P23193 301 aaKnown RBP8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 TYK2P29597 1187 aa8.51□□□□□ -1.05
SMARCE1-210ENST00000481231 SRD5A2P31213 254 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms