RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FAM159BA6NKW6 160 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 A8MXE2 369 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-211ENST00000471455 CLDN9O95484 217 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 LY6G6DO95868 133 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 PORP16435 677 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-211ENST00000471455 SSTR1P30872 391 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 SRD5A2P31213 254 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 KRT20P35900 424 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 EEFSECP57772 596 aaKnown RBP8.28□□□□□ -1.08
CPSF4-211ENST00000471455 MRPS22P82650 360 aaKnown RBP8.28□□□□□ -1.08
CPSF4-211ENST00000471455 FOXF2Q12947 444 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 GTF2H2Q13888 395 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 DOC2BQ14184 412 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 PFKFB4Q16877 469 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 ALKBH2Q6NS38 261 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 GTF2H2CQ6P1K8 395 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 C3orf62Q6ZUJ4 267 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 YTHDF3Q7Z739 585 aaKnown RBP8.28□□□□□ -1.08
CPSF4-211ENST00000471455 ADGRE4PQ86SQ3 457 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 L3MBTL4Q8NA19 623 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 ATP6V1E2Q96A05 226 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 OMA1Q96E52 524 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 LCORQ96JN0 433 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-211ENST00000471455 Q96MF0 132 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 LRRC1Q9BTT6 524 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 MED18Q9BUE0 208 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 BRINP2Q9C0B6 783 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 NXF5Q9H1B4 397 aaKnown RBP8.28□□□□□ -1.08
CPSF4-211ENST00000471455 SERHLQ9NQF3 203 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 SMYD2Q9NRG4 433 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 ELOVL5Q9NYP7 299 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 TAS2R10Q9NYW0 307 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 CLCF1Q9UBD9 225 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 BCAP29Q9UHQ4 241 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 DKKL1Q9UK85 242 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 MAPRE3Q9UPY8 281 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 ACOT9Q9Y305 439 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 SNX24Q9Y343 169 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 EXPH5Q8NEV8 1989 aa8.28□□□□□ -1.08
CPSF4-211ENST00000471455 UQCRHLA0A096LP55 91 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 A0A1W2PNV4 684 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 C1orf226A1L170 272 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 OR6C70A6NIJ9 312 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CTIFO43310 598 aaKnown RBP8.27□□□□□ -1.09
CPSF4-211ENST00000471455 TMCC2O75069 709 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 ICOSLGO75144 302 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 PIAS1O75925 651 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 BCAS2O75934 225 aaPredicted RBP8.27□□□□□ -1.09
CPSF4-211ENST00000471455 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.091e-8■■■■■ 30.2
CPSF4-211ENST00000471455 ATP1B1P05026 303 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CT62P0C5K7 136 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CSNK2A2P19784 350 aaPredicted RBP8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CRYGSP22914 178 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 PCSK6P29122 969 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CD79BP40259 229 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 MC3RP41968 323 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 SLCO1A2P46721 670 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 MAPK12P53778 367 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 IFT88Q13099 833 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 EFR3AQ14156 821 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 ACAP2Q15057 778 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 NNATQ16517 81 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 BCL2A1Q16548 175 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 ACKR1Q16570 336 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CCNYL2Q5T2Q4 361 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 TTC19Q6DKK2 380 aaPredicted RBP8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CMC1Q7Z7K0 106 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 PLCZ1Q86YW0 608 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 GCNT2Q8N0V5 402 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 RNF175Q8N4F7 328 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 PPM1NQ8N819 430 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CNEP1R1Q8N9A8 125 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 ADCY4Q8NFM4 1077 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 SPATA3Q8NHX4 192 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 WDR20Q8TBZ3 569 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 SLC44A1Q8WWI5 657 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 HGDQ93099 445 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 CAVIN3Q969G5 261 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 COL21A1Q96P44 957 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 FAM111AQ96PZ2 611 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
CPSF4-211ENST00000471455 FAIM2Q9BWQ8 316 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 ITPAQ9BY32 194 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 IPPKQ9H8X2 491 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 UBTD1Q9HAC8 227 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 FANCFQ9NPI8 374 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 NMRK1Q9NWW6 199 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 WHRNQ9P202 907 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 RNF14Q9UBS8 474 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 TMCO1Q9UM00 188 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 MRPS18CQ9Y3D5 142 aaKnown RBP8.27□□□□□ -1.09
CPSF4-211ENST00000471455 WIF1Q9Y5W5 379 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 SAR1BQ9Y6B6 198 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 ZNF780BQ9Y6R6 833 aa8.27□□□□□ -1.09
CPSF4-211ENST00000471455 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 FRG2CA6NGY1 282 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 SLC22A20A6NK97 555 aa8.26□□□□□ -1.09
CPSF4-211ENST00000471455 LINC01387J3KSC0 135 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms