RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ADNPQ9H2P0 1102 aa2.64□□□□□ -1.99
XRN1-206ENST00000467077 RNF41Q9H4P4 317 aaPredicted RBP2.64□□□□□ -1.99
XRN1-206ENST00000467077 MRPL17Q9NRX2 175 aaKnown RBP2.64□□□□□ -1.99
XRN1-206ENST00000467077 KLK11Q9UBX7 282 aa2.64□□□□□ -1.99
XRN1-206ENST00000467077 PILRAQ9UKJ1 303 aa2.64□□□□□ -1.99
XRN1-206ENST00000467077 DDX19BQ9UMR2 479 aa2.64□□□□□ -1.99
XRN1-206ENST00000467077 MRPS18CQ9Y3D5 142 aaKnown RBP2.64□□□□□ -1.99
XRN1-206ENST00000467077 COL4A2P08572 1712 aa2.64□□□□□ -1.99
XRN1-206ENST00000467077 DSPP15924 2871 aaKnown RBP2.64□□□□□ -1.99
XRN1-206ENST00000467077 NUP205Q92621 2012 aa2.64□□□□□ -1.99
XRN1-206ENST00000467077 RIF1Q5UIP0 2472 aaKnown RBP2.64□□□□□ -1.99
XRN1-206ENST00000467077 FRMPD4Q14CM0 1322 aa2.64□□□□□ -1.99
XRN1-206ENST00000467077 MYO16Q9Y6X6 1858 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ARHGEF33A8MVX0 844 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 H3BMM5 538 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 DDX39AO00148 427 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 IFIT3O14879 490 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 PHF1O43189 567 aaPredicted RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 LRP3O75074 770 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 TGDSO95455 350 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 LY6G6DO95868 133 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 RLN1P04808 185 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ANKRD34CP0C6C1 535 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ZNF32P17041 273 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 MUTP22033 750 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 KIF5BP33176 963 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 RPS9P46781 194 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 CDX1P47902 265 aaPredicted RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 SLC11A1P49279 550 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 SLC26A2P50443 739 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 NOVA1P51513 510 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 NLRP11P59045 1033 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 SRSF5Q13243 272 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 HTR4Q13639 388 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 SF3A2Q15428 464 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 CDO1Q16878 200 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 NHSL2Q5HYW2 709 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 SPANXN4Q5MJ08 99 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 FUT10Q6P4F1 479 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 DHRS11Q6UWP2 260 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 BTNL8Q6UX41 500 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 C5orf24Q7Z6I8 188 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 PRUNE1Q86TP1 453 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 CATSPER3Q86XQ3 398 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 PRSS35Q8N3Z0 413 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 UXS1Q8NBZ7 420 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 OR5M9Q8NGP3 310 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 URGCPQ8TCY9 931 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 SLC26A7Q8TE54 656 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ATP6V1E2Q96A05 226 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 C11orf52Q96A22 123 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 DESI2Q9BSY9 194 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 CCDC28BQ9BUN5 200 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 MLPHQ9BV36 600 aaPredicted RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 OCR1Q9BZK8 76 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 NT5C3AQ9H0P0 336 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 CHMP4BQ9H444 224 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 IL1RAPQ9NPH3 570 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 PRMT8Q9NR22 394 aaPredicted RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 IARS2Q9NSE4 1012 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 EXOC1Q9NV70 894 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 SLC12A6Q9UHW9 1150 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 MAD2L2Q9UI95 211 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ITGA11Q9UKX5 1188 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 NOL7Q9UMY1 257 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 NDRG2Q9UN36 371 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 PLCL2Q9UPR0 1127 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ZFP37Q9Y6Q3 630 aaPredicted RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 EPG5Q9HCE0 2579 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 GVINP1Q7Z2Y8 2422 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ZNF638Q14966 1978 aaKnown RBP2.63□□□□□ -1.99
XRN1-206ENST00000467077 THADAQ6YHU6 1953 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 ZMYM6O95789 1325 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 TTC41PQ6P2S7 1318 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 KIAA1549LQ6ZVL6 1849 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 CACNA1HO95180 2353 aa2.63□□□□□ -1.99
XRN1-206ENST00000467077 SPAG17Q6Q759 2223 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 COL1A2P08123 1366 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 SETXQ7Z333 2677 aaKnown RBP2.62□□□□□ -1.99
XRN1-206ENST00000467077 OTOGLQ3ZCN5 2332 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 A0A0D9SFI3 127 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 ZNF840PA6NDX5 716 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 PRSS46E5RG02 174 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 PSMA7O14818 248 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 OGTO15294 1046 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 FLRT2O43155 660 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 ST8SIA3O43173 380 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 TNFSF12O43508 249 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 CYTH3O43739 400 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 ZNF354AO60765 605 aaPredicted RBP2.62□□□□□ -1.99
XRN1-206ENST00000467077 CSDE1O75534 798 aaKnown RBP2.62□□□□□ -1.99
XRN1-206ENST00000467077 MX1P20591 662 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 GIFP27352 417 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 TMOD1P28289 359 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 OR1G1P47890 313 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 KCNJ1P48048 391 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 CXCL12P48061 93 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 KHKP50053 298 aa2.62□□□□□ -1.99
XRN1-206ENST00000467077 ABCE1P61221 599 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms