RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PRDX6P30041 224 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 HOXA6P31267 233 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 ACAA2P42765 397 aaKnown RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 MAGEA11P43364 429 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SLC6A12P48065 614 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 FUT6P51993 359 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 ARFIP1P53367 373 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 TNNC1P63316 161 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 TRAP1Q12931 704 aaKnown RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 ZBTB17Q13105 803 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 KRT31Q15323 416 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SF3B4Q15427 424 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 CFAP221Q4G0U5 840 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 FASTKD1Q53R41 847 aaKnown RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SDHAF4Q5VUM1 108 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 KLHL10Q6JEL2 608 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SLC25A24Q6NUK1 477 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 IRGCQ6NXR0 463 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 C16orf82Q7Z2V1 217 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 C5orf24Q7Z6I8 188 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SYVN1Q86TM6 617 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 MAPKAPK5-AS1Q8N8E1 139 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 LRTM2Q8N967 370 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 STKLD1Q8NE28 680 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 RPLP0P6Q8NHW5 317 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 LRRC15Q8TF66 581 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 HSD17B8Q92506 261 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 N4BP2L2Q92802 583 aaPredicted RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 CD101Q93033 1021 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 MYLPFQ96A32 169 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 HPDLQ96IR7 371 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 ZNF396Q96N95 335 aaPredicted RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 P2RY13Q9BPV8 354 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SYT15Q9BQS2 421 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 CBWD1Q9BRT8 395 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 PANK2Q9BZ23 570 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 LAT2Q9GZY6 243 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 NACA2Q9H009 215 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SIRPDQ9H106 197 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 DPEP3Q9H4B8 488 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 RNF121Q9H920 327 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 PALMDQ9NP74 551 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 SDR39U1Q9NRG7 319 aaPredicted RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 FAM207AQ9NSI2 230 aaPredicted RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 GDAP2Q9NXN4 497 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 FAM153AQ9UHL3 310 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 ZDHHC2Q9UIJ5 367 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 POU2F3Q9UKI9 436 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 CDH9Q9ULB4 789 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 PLA2G4CQ9UP65 541 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 CCL26Q9Y258 94 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 NCKAP1Q9Y2A7 1128 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.89□□□□□ -1.79
LINC00393-202ENST00000452852 ZNF292O60281 2723 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 UBE4BO95155 1302 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 ASPMQ8IZT6 3477 aa3.89□□□□□ -1.79
LINC00393-202ENST00000452852 TNRC6BQ9UPQ9 1833 aaKnown RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 MYOFQ9NZM1 2061 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 PTPRZ1P23471 2315 aaPredicted RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 PLXND1Q9Y4D7 1925 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 A0A0U1RRA0 63 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 C2orf81A6NN90 581 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 TRDMT1O14717 391 aaKnown RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 SLC9A3R1O14745 358 aaPredicted RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 SCO2O43819 266 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 PDE9AO76083 593 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 APOHP02749 345 aaPredicted RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 ZNF806P0C7X5 589 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 ZCCHC18P0CG32 403 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 MSH3P20585 1137 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 SYT1P21579 422 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 LHCGRP22888 699 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 WARSP23381 471 aaKnown RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 ADSSP30520 456 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 SRD5A2P31213 254 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 CSTF2P33240 577 aaKnown RBP eCLIP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 NSFP46459 744 aaKnown RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 GLIPR1P48060 266 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 FMO5P49326 533 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 SNRPFP62306 86 aaKnown RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 LGALS3BPQ08380 585 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 ELP6Q0PNE2 266 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 SQLEQ14534 574 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 DMC1Q14565 340 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 HERC3Q15034 1050 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 ZNF77Q15935 545 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 CCDC6Q16204 474 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 SNRNP35Q16560 246 aaKnown RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 CARTPTQ16568 116 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 GPR33Q49SQ1 333 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 TMEM26Q6ZUK4 368 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 PRUNE1Q86TP1 453 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 AMZ2Q86W34 360 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 WDR49Q8IV35 697 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 MUC20Q8N307 709 aaPredicted RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 TSTD1Q8NFU3 115 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 UBTD2Q8WUN7 234 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 PHLDA1Q8WV24 401 aaPredicted RBP3.88□□□□□ -1.79
LINC00393-202ENST00000452852 CCDC127Q96BQ5 260 aa3.88□□□□□ -1.79
LINC00393-202ENST00000452852 ULK4Q96C45 1275 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms