RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ERVK-19Q9WJR5 959 aa5.3□□□□□ -1.56
CDC42BPA-209ENST00000448940 A0A1W2PPL8 197 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 TCRBV7S2A1N4TA0A589 114 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 LGALS8O00214 317 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CRYAAP02489 173 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 OPN1LWP04000 364 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SERPINA7P05543 415 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 IDO1P14902 403 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ACADLP28330 430 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 AGFG1P52594 562 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 MAT1AQ00266 395 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 DOC2BQ14184 412 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF460Q14592 562 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 KRTCAP3Q53RY4 240 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC30A6Q6NXT4 461 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CCNI2Q6ZMN8 369 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ST13P4Q8IZP2 240 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RBP7Q96R05 134 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRO3102Q9H379 93 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRDM9Q9NQV7 894 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RYDENQ9NUL5 291 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 PARPBPQ9NWS1 579 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 BAIAP2L1Q9UHR4 511 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 LEF1Q9UJU2 399 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 NDRG4Q9ULP0 352 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 H3BN98 237 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 AK1P00568 194 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CSTAP01040 98 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 AHSGP02765 367 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 EIF4EP06730 217 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ABHD2P08910 425 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CD99P14209 185 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 PRPS1L1P21108 318 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 GABRA2P47869 451 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CSNK2A1P68400 391 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RBM20Q5T481 1227 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 BNC2Q6ZN30 1099 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 FRMD7Q6ZUT3 714 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CPNE8Q86YQ8 564 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 DOK4Q8TEW6 326 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 MOAP1Q96BY2 351 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 INTS12Q96CB8 462 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRNT1Q96Q11 434 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 LYSMD1Q96S90 227 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 DDA1Q9BW61 102 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 OGFRQ9NZT2 677 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ENOPH1Q9UHY7 261 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 WDR45Q9Y484 360 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 BCKDKO14874 412 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RIPK2O43353 540 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ATE1O95260 518 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 HSD3B1P14060 373 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 BGNP21810 368 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ELAVL4P26378 380 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RPS23P62266 143 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SH3BP2P78314 561 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SEMA3BQ13214 749 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RCN1Q15293 331 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 INPP5JQ15735 1006 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ARMCX4Q5H9R4 360 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 AGAP6Q5VW22 663 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF549Q6P9A3 640 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 TRILQ7L0X0 811 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 OLFM1Q99784 485 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 USE1Q9NZ43 259 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 POMT2Q9UKY4 750 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 MED31Q9Y3C7 131 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RAP2CQ9Y3L5 183 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SULT2B1O00204 365 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 IFNGP01579 166 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 IGLV3-25P01717 112 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 IRX1P78414 480 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 PUDPQ08623 228 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF763Q0D2J5 394 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CRB2Q5IJ48 1285 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 TNFAIP8L2Q6P589 184 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 WDR74Q6RFH5 385 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RIPOR1Q6ZS17 1223 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ADCK1Q86TW2 530 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 TEX26Q8N6G2 289 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 FIG4Q92562 907 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ANKRD27Q96NW4 1050 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 TECTBQ96PL2 329 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SPRTNQ9H040 489 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 YARS2Q9Y2Z4 477 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC35F4A4IF30 521 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 C1orf105O95561 183 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ZNF43P17038 809 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 ITGA2P17301 1181 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CD247P20963 164 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 CBLP22681 906 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 HSPA13P48723 471 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 RAB38P57729 211 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 SLC3A1Q07837 685 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 LASP1Q14847 261 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 DNM1P34Q6PK57 102 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 DEF8Q6ZN54 512 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 NAGSQ8N159 534 aa5.29□□□□□ -1.56
CDC42BPA-209ENST00000448940 OR4F15Q8NGB8 312 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms