RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 KLF11O14901 512 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 SCAMP2O15127 329 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 COQ9O75208 318 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 UGT2B11O75310 529 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 RFPL3SP0C7P2 107 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 LAMP1P11279 417 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 G6PDP11413 515 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 ABOP16442 354 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 EFNA1P20827 205 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 PTGS2P35354 604 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 HPCAL1P37235 193 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 RPL3P39023 403 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 CASP3P42574 277 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 FRKP42685 505 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 CASP6P55212 293 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 PER3P56645 1201 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 RPP38P78345 283 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 PLCXD2Q0VAA5 305 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 HSPB3Q12988 150 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 MAD2L1Q13257 205 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 PTGR1Q14914 329 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 SLC10A1Q14973 349 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 SMU1Q2TAY7 513 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 TBCELQ5QJ74 424 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 CPTPQ5TA50 214 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 GKAP1Q5VSY0 366 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 TMEM198Q66K66 360 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 ATG16L1Q676U5 607 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 PAOXQ6QHF9 649 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 C6orf89Q6UWU4 347 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 NPSR1Q6W5P4 371 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 Q6ZPB1 254 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 YTHDF3Q7Z739 585 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 SLC44A2Q8IWA5 706 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 OR2L13Q8N349 312 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 FAM109AQ8N4B1 249 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 KRTCAP2Q8N6L1 136 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 OR7A2PQ8NGA2 310 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 OR4N2Q8NGD1 307 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 ZFP28Q8NHY6 868 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 HGDQ93099 445 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 TMBIM1Q969X1 311 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 ZBED6CLQ96FA7 236 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 JSRP1Q96MG2 331 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 NODALQ96S42 347 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 ANGPTL4Q9BY76 406 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 NUF2Q9BZD4 464 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 NSRP1Q9H0G5 558 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 MANSC1Q9H8J5 431 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 ACSS1Q9NUB1 689 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 DDX18Q9NVP1 670 aaKnown RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 THAP1Q9NVV9 213 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 SH3BGRL2Q9UJC5 107 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 TINAGQ9UJW2 476 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 BOKQ9UMX3 212 aaPredicted RBP9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 PTPN13Q12923 2485 aa9.29□□□□□ -0.92
CTDSPL-207ENST00000447745 DIDO1Q9BTC0 2240 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 ERICH4A6NGS2 130 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 OR6C70A6NIJ9 312 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 LRRC3CA6NJW4 275 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 PRRG2O14669 202 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 SNX3O60493 162 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 TSPAN2O60636 221 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 ZG16O60844 167 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 SNNO75324 88 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 TRIM3O75382 744 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 SNX4O95219 450 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 PSMG1O95456 288 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 VIMP08670 466 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 CELA3AP09093 270 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 IFI6P09912 130 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 DDX5P17844 614 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 PRPS1L1P21108 318 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 CDK9P50750 372 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 PRKAG1P54619 331 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 PSG6Q00889 435 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 ZNF155Q12901 538 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 GAB1Q13480 694 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 ARHGAP11AQ6P4F7 1023 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 LARP4Q71RC2 724 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 WDR53Q7Z5U6 358 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 PACS2Q86VP3 889 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 DOLPP1Q86YN1 238 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 TRIM42Q8IWZ5 723 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 RIMKLAQ8IXN7 391 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 CEP70Q8NHQ1 597 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 RAB3IL1Q8TBN0 382 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 ZNF75CPQ92670 426 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 NTNG2Q96CW9 530 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 COQ8BQ96D53 544 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 SLC35A4Q96G79 324 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 RILPQ96NA2 401 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 COL21A1Q96P44 957 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 ADOQ96SZ5 270 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 PRPF18Q99633 342 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 ASIC5Q9NY37 505 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 NOP53Q9NZM5 478 aaKnown RBP9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 NTMQ9P121 344 aa9.28□□□□□ -0.92
CTDSPL-207ENST00000447745 OR10H1Q9Y4A9 318 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms