RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 IGLV4-60A0A075B6I1 120 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 IGKV2D-24A0A075B6R9 120 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CCL15-CCL14A0A0B4J2E2 113 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 TCRBV21S2A2A0A5A6 115 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 FSD2A1L4K1 749 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 MTMR11A4FU01 709 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ZFP92A6NM28 416 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CCT8L1PA6NM43 557 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ATP6AP2O75787 350 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 FGF19O95750 216 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SEMA4FO95754 770 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 BAG3O95817 575 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 AGR2O95994 175 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CSN3P07498 182 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ABCB1P08183 1280 aaPredicted RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 HCKP08631 526 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 GIG44P09565 113 aaPredicted RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 P0C879 139 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 STAG3L1P0CL83 205 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 P4HA1P13674 534 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SPRR2DP22532 72 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 FASP25445 335 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CALML3P27482 149 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 NF2P35240 595 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ACTN2P35609 894 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SLC1A3P43003 542 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SLC26A2P50443 739 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 NDST1P52848 882 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CRYBB1P53674 252 aaPredicted RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CSE1LP55060 971 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 PEX3P56589 373 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CLDN15P56746 228 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CKAP4Q07065 602 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 KLRC3Q07444 240 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 IL10RBQ08334 325 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CD47Q08722 323 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 RASGEF1BQ0VAM2 473 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 EBI3Q14213 229 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 IRF3Q14653 427 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ABRAXAS2Q15018 415 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CEBPEQ15744 281 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CCL15Q16663 113 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 PCK2Q16822 640 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 PAGE2BQ5JRK9 111 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 C9orf129Q5T035 196 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 TEX35Q5T0J7 233 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SPOUT1Q5T280 376 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 WDR78Q5VTH9 848 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 OTPQ5XKR4 325 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 OR4C11Q6IEV9 310 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CCDC70Q6NSX1 233 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ENPP7Q6UWV6 458 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 RFPL4BQ6ZWI9 263 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 DNAAF5Q86Y56 855 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ZNF595Q8IYB9 648 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CADM2Q8N3J6 435 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ZNF561Q8N587 486 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ZNF781Q8N8C0 355 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SYT2Q8N9I0 419 aaPredicted RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CAMKVQ8NCB2 501 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ST6GALNAC6Q969X2 333 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 RSRC1Q96IZ7 334 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SPATA13Q96N96 652 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 RCHY1Q96PM5 261 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 NEDD4LQ96PU5 975 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CCT8L2Q96SF2 557 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CPNE1Q99829 537 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 CCSER1Q9C0I3 900 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SNX25Q9H3E2 840 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 DPEP2Q9H4A9 486 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 VIPAS39Q9H9C1 493 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 PATZ1Q9HBE1 687 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 PDRG1Q9NUG6 133 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ZNF215Q9UL58 517 aaPredicted RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 SMC3Q9UQE7 1217 aa0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 NIP7Q9Y221 180 aaKnown RBP eCLIP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ZFP37Q9Y6Q3 630 aaPredicted RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 INTS1Q8N201 2190 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 ZNF106Q9H2Y7 1883 aaKnown RBP0.71□□□□□ -2.3
HMGN1P33-201ENST00000432945 KANK1Q14678 1352 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 RFX7Q2KHR2 1363 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 TRAV18A0A075B6X5 111 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 KIR2DL5BA0A0G2JN68 375 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 KIR2DL5BA0A0G2JPC4 375 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 EDDM13A0A1B0GTR0 161 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 A0A1W2PQ09 198 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 LOC390937A0A1W2PQ73 354 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 FEZF1A0PJY2 475 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 CLRN2A0PK11 232 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 FAM149AA5PLN7 773 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 EFCAB7A8K855 629 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 TMEM150CB9EJG8 249 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 J3KRW8 73 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 PTGESO14684 152 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 EMC8O43402 210 aa0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 EPB41L2O43491 1005 aaKnown RBP0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 USO1O60763 962 aaKnown RBP0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 FRAT2O75474 233 aaPredicted RBP0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 RECQL5O94762 991 aaPredicted RBP0.7□□□□□ -2.3
HMGN1P33-201ENST00000432945 OR6B1O95007 311 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms