RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MROH1Q8NDA8 1641 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 CTTNBP2Q8WZ74 1663 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 KIDINS220Q9ULH0 1771 aa2.56□□□□□ -2
HMGB1P27-201ENST00000431429 NPIPA5A0A0B4J1W7 369 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 IGHV3-16A0A0C4DH30 117 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 TRIM49BA6NDI0 452 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 RNF212BA8MTL3 300 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 NPIPA5E9PKD4 350 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 LGALS8O00214 317 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 CYB561D2O14569 222 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ALOX15BO15296 676 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 LINC01565O15544 149 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 PLXNC1O60486 1568 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 NOL3O60936 208 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ECDO95905 644 aaPredicted RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 RRASP10301 218 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 HSPA5P11021 654 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 CD1DP15813 335 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 HMGB2P26583 209 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 CALRP27797 417 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 PPP2R1AP30153 589 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ETV5P41161 510 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ACADVLP49748 655 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 GSK3BP49841 420 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 NDUFV3P56181 108 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 HERVK_113P63132 956 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ERVK-8P63133 956 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ERVK-7P63135 1459 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 IRX1P78414 480 aaPredicted RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ELP6Q0PNE2 266 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 MAP3K1Q13233 1512 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 RFTN1Q14699 578 aaPredicted RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 SHPRHQ149N8 1683 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 EEA1Q15075 1411 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 FCN2Q15485 313 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 PCK2Q16822 640 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 C17orf58Q2M2W7 97 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 PARP6Q2NL67 630 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 DCAF4L1Q3SXM0 396 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 GLIPR1L2Q4G1C9 344 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 LINC01620Q4KN68 170 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 TMEM41BQ5BJD5 291 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 MUC21Q5SSG8 566 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 DDI2Q5TDH0 399 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 SLC25A24Q6NUK1 477 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 FAAP20Q6NZ36 180 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 NIPAL3Q6P499 406 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 AFTPHQ6ULP2 937 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 CBLN3Q6UW01 205 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 TMEM184AQ6ZMB5 413 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 Q6ZTC4 211 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF573Q86YE8 665 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 CBWD2Q8IUF1 395 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 GRAMD2AQ8IUY3 354 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 MISPQ8IVT2 679 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 GCNT2Q8N0V5 402 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 PYROXD2Q8N2H3 581 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 GMCL1P1Q8NEA9 526 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 IPMKQ8NFU5 416 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 RAB7BQ96AH8 199 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 WBP1Q96G27 269 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 FYCO1Q9BQS8 1478 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 TTYH2Q9BSA4 534 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 MCRIP2Q9BUT9 160 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ERVK-6Q9BXR3 956 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 LRRCC1Q9C099 1032 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 NACA2Q9H009 215 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 UPF3AQ9H1J1 476 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 DPH5Q9H2P9 285 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 TUBB1Q9H4B7 451 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ALG9Q9H6U8 611 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 MOB1AQ9H8S9 216 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 YAE1D1Q9NRH1 226 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 AGPAT5Q9NUQ2 364 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 ITSN2Q9NZM3 1697 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 MLXQ9UH92 298 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 CIDEBQ9UHD4 219 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 GPATCH8Q9UKJ3 1502 aaKnown RBP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 RARRES3Q9UL19 164 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 TMCC3Q9ULS5 477 aa2.55□□□□□ -2
HMGB1P27-201ENST00000431429 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P27-201ENST00000431429 UNC13BO14795 1591 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TIAM1Q13009 1591 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 DISP2A7MBM2 1401 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TRGV8A0A0C4DH27 118 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 ANKRD30BLA7E2S9 258 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 H3BTX0 84 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 E2F3O00716 465 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 SDHDO14521 159 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TM9SF1O15321 606 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 SCGB2A1O75556 95 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 SORBS2O94875 1100 aaKnown RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 OR4F21O95013 312 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 HOXB7P09629 217 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 OR9G9P0C7N8 305 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 CYP2F1P24903 491 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 LMO2P25791 158 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 UCP1P25874 307 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 HTR2AP28223 471 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms