RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 KIR3DP1A8MWS1 328 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 FCHO1O14526 889 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 NME6O75414 186 aaPredicted RBP16.49■□□□□ 0.23
VCP-202ENST00000417448 BCKDHAP12694 445 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 PORP16435 677 aaPredicted RBP16.49■□□□□ 0.23
VCP-202ENST00000417448 NT5EP21589 574 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 UQCRC1P31930 480 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 PLIN5Q00G26 463 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 OCRLQ01968 901 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 RNF165Q6ZSG1 346 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 CCDC116Q8IYX3 515 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 ST13P4Q8IZP2 240 aaPredicted RBP16.49■□□□□ 0.23
VCP-202ENST00000417448 LIX1Q8N485 282 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 OR14A16Q8NHC5 309 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 ZNF721Q8TF20 911 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 DYDC1Q8WWB3 177 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 RIT1Q92963 219 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 VMP1Q96GC9 406 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 FCRL1Q96LA6 429 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 AKTIPQ9H8T0 292 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 PLEKHF2Q9H8W4 249 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 SLCO1B3Q9NPD5 702 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 HAO1Q9UJM8 370 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 GOLGA8QA0A0J9YX86 632 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 GOLGA8OA6NCC3 632 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 NPIPB8E9PQR5 432 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 GOLGA8NF8WBI6 632 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 SLC35E2P0CK97 266 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 COX7A2P14406 83 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 EFNA1P20827 205 aaPredicted RBP16.48■□□□□ 0.23
VCP-202ENST00000417448 SSTR4P31391 388 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 SOX18P35713 384 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 CLCN2P51788 898 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 PPIAP62937 165 aaKnown RBP16.48■□□□□ 0.23
VCP-202ENST00000417448 ATP6AP1LQ52LC2 224 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 IL23RQ5VWK5 629 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 PAOXQ6QHF9 649 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 WDR75Q8IWA0 830 aaKnown RBP16.48■□□□□ 0.23
VCP-202ENST00000417448 TRIM42Q8IWZ5 723 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 FNDC5Q8NAU1 212 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 RELL2Q8NC24 303 aaPredicted RBP16.48■□□□□ 0.23
VCP-202ENST00000417448 MORN4Q8NDC4 146 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 FAM222BQ8WU58 562 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 DAZLQ92904 295 aaKnown RBP16.48■□□□□ 0.23
VCP-202ENST00000417448 COX4I2Q96KJ9 171 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 PPP3R2Q96LZ3 170 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 ZNF681Q96N22 645 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 BRINP2Q9C0B6 783 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 CXorf21Q9HAI6 301 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 NEUROD4Q9HD90 331 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 MYNNQ9NPC7 610 aa16.48■□□□□ 0.23
VCP-202ENST00000417448 INTS9Q9NV88 658 aaKnown RBP16.48■□□□□ 0.23
VCP-202ENST00000417448 NCKAP5O14513 1909 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 ARID1AO14497 2285 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 OR14I1A6ND48 311 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 FAM171A2A8MVW0 826 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 WWP2O00308 870 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 SYT5O00445 386 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 BCKDKO14874 412 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 ITGA10O75578 1167 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 CLPSP04118 112 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 DCAF7P61962 342 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 NKX6-1P78426 367 aaPredicted RBP16.47■□□□□ 0.23
VCP-202ENST00000417448 MRPS35P82673 323 aaKnown RBP16.47■□□□□ 0.23
VCP-202ENST00000417448 MGAT2Q10469 447 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 HEPACAMQ14CZ8 416 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 EXOSC7Q15024 291 aaKnown RBP16.47■□□□□ 0.23
VCP-202ENST00000417448 DAZAP2Q15038 168 aaPredicted RBP16.47■□□□□ 0.23
VCP-202ENST00000417448 TERF2Q15554 542 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 ZNF385BQ569K4 471 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 TMEM156Q8N614 296 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 PSD4Q8NDX1 1056 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 FAM76AQ8TAV0 307 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 LRRC8CQ8TDW0 803 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 KAT2AQ92830 837 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 TTTY12Q9BZ98 90 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 WDR55Q9H6Y2 383 aaPredicted RBP16.47■□□□□ 0.23
VCP-202ENST00000417448 SLC35C2Q9NQQ7 365 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 PPIEQ9UNP9 301 aaKnown RBP16.47■□□□□ 0.23
VCP-202ENST00000417448 ZNF780BQ9Y6R6 833 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 NINQ8N4C6 2090 aa16.47■□□□□ 0.23
VCP-202ENST00000417448 INAFM1C9JVW0 142 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 SDHDO14521 159 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 ZNF354AO60765 605 aaPredicted RBP16.46■□□□□ 0.23
VCP-202ENST00000417448 IGHG3P01860 377 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 CD53P19397 219 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 CSNK2A2P19784 350 aaPredicted RBP16.46■□□□□ 0.23
VCP-202ENST00000417448 DDCP20711 480 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 PTGR1Q14914 329 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 TRMT12Q53H54 448 aaKnown RBP16.46■□□□□ 0.23
VCP-202ENST00000417448 HSDL2Q6YN16 418 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 FAM47EQ6ZV65 393 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 MAVSQ7Z434 540 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 C9orf40Q8IXQ3 194 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 KRTCAP2Q8N6L1 136 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 OR2M7Q8NG81 312 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 RAB3IL1Q8TBN0 382 aa16.46■□□□□ 0.23
VCP-202ENST00000417448 CIDECQ96AQ7 238 aaPredicted RBP16.46■□□□□ 0.23
VCP-202ENST00000417448 TIMMDC1Q9NPL8 285 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms