RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 OR51E2Q9H255 320 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF701Q9NV72 531 aaPredicted RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 ADAM23O75077 832 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 PAHP00439 452 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 CKMT1AP12532 417 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 TAP2Q03519 686 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 KIR2DS3Q14952 304 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 PPA1Q15181 289 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 CST6Q15828 149 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 NIPAL3Q6P499 406 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 PGM2L1Q6PCE3 622 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 DPY19L3Q6ZPD9 716 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 COMMD7Q86VX2 200 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 RNF128Q8TEB7 428 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 JPH3Q8WXH2 748 aaPredicted RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 ASB17Q8WXJ9 295 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 SORCS1Q8WY21 1168 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 CNOT9Q92600 299 aaKnown RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 PMM1Q92871 262 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF587Q96SQ5 575 aaPredicted RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 LMF2Q9BU23 707 aaKnown RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 CENPOQ9BU64 300 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 C17orf113A0A1B0GUU1 675 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 SRPX2O60687 465 aaPredicted RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 GJB5O95377 273 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 AKAIN1P0CW23 69 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 SYN1P17600 705 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 S100A7P31151 101 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 GATMP50440 423 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 MLLT10P55197 1068 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 CNN3Q15417 329 aaKnown RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 CLVS2Q5SYC1 327 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 MLIPQ5VWP3 458 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 METAP1DQ6UB28 335 aaPredicted RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 TMEM150AQ86TG1 271 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 OR5W2Q8NH69 310 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 TRMT10AQ8TBZ6 339 aaKnown RBP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 UBTD2Q8WUN7 234 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 GSTO2Q9H4Y5 243 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 AGPAT4Q9NRZ5 378 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 MED17Q9NVC6 651 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 EBF1Q9UH73 591 aa7.94□□□□□ -1.14
SPTLC3-201ENST00000399002 FOXE1O00358 373 aaPredicted RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 POLR1CO15160 346 aaPredicted RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF16P17020 682 aaPredicted RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ITGB7P26010 798 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 EIF2DP41214 584 aaKnown RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 PRKXP51817 358 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 CASP6P55212 293 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 TAS2R20P59543 309 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 SGCAQ16586 387 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ACTBL2Q562R1 376 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 UBE2NLQ5JXB2 153 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 CRTC1Q6UUV9 634 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 CCBE1Q6UXH8 406 aaPredicted RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 TMPPEQ6ZT21 453 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 GPRIN1Q7Z2K8 1008 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 TPRA1Q86W33 373 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 LHPPQ9H008 270 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 NMNAT1Q9HAN9 279 aaPredicted RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 TXNRD2Q9NNW7 524 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 NANSQ9NR45 359 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 A0A0J9YY10 115 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF850A8MQ14 1090 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 LYRM1O43325 122 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 HCRTO43612 131 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 IFNA17P01571 189 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 GBAP04062 536 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 SFTPBP07988 381 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 JMJD7P0C870 316 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 IVDP26440 423 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 SH3BP2P78314 561 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 RNASE10Q5GAN6 216 aaKnown RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 RPS27LQ71UM5 84 aaKnown RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 FOXRED2Q8IWF2 684 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ANKK1Q8NFD2 765 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ZDHHC1Q8WTX9 485 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ARL11Q969Q4 196 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 TRMT2BQ96GJ1 504 aaKnown RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 FAM46AQ96IP4 442 aaKnown RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 PFDN5Q99471 154 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 SLC6A7Q99884 636 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 TREX2Q9BQ50 279 aaPredicted RBP7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 CERS4Q9HA82 394 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 TMX2-CTNND1H3BSU7 103 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 GOSR2O14653 212 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 SCAMP1O15126 338 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 KCNJ5P48544 419 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ERVPABLB-1P60509 514 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 PLAG1Q6DJT9 500 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 AWAT2Q6E213 333 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 C5orf46Q6UWT4 87 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF765Q7L2R6 523 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 KLHDC8AQ8IYD2 350 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ACVR1CQ8NER5 493 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 OR52E2Q8NGJ4 325 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ZNF597Q96LX8 424 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 CNTNAP3BQ96NU0 1288 aa7.93□□□□□ -1.14
SPTLC3-201ENST00000399002 ZFYVE21Q9BQ24 234 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms