RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 PDE5AO76074 875 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 TOXO94900 526 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 APBB3O95704 486 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 MT-ND1P03886 318 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 TPM3P06753 285 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 MELTFP08582 738 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 HSD17B1P14061 328 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 HOXD10P28358 340 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 RFC2P35250 354 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 SLC7A2P52569 658 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 HAND2P61296 217 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 CYLC2Q14093 348 aaPredicted RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 LPAL2Q16609 132 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 C17orf58Q2M2W7 97 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 TMEM44Q2T9K0 475 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ACER2Q5QJU3 275 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 SEL1L2Q5TEA6 688 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 LEMD1Q68G75 181 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 LEG1Q6P5S2 330 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ARSKQ6UWY0 536 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ABRAXAS1Q6UWZ7 409 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 APOOLQ6UXV4 268 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 STOX1Q6ZVD7 989 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 P4HA3Q7Z4N8 544 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 SLC25A42Q86VD7 318 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 VPS36Q86VN1 386 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 IQCF2Q8IXL9 164 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 PDCL2Q8N4E4 241 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 SUMF1Q8NBK3 374 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF485Q8NCK3 441 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 OR4F17Q8NGA8 305 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 CCDC110Q8TBZ0 833 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 SELENOMQ8WWX9 145 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 RASL10AQ92737 203 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 DLX4Q92988 240 aaPredicted RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF396Q96N95 335 aaPredicted RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 OR4F4Q96R69 305 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 PSMB7Q99436 277 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 SOSTQ9BQB4 213 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 FAM173AQ9BQD7 235 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 TSPY26PQ9H489 355 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 VAT1LQ9HCJ6 419 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 POLE3Q9NRF9 147 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 YAE1D1Q9NRH1 226 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ABCC13Q9NSE7 274 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 CENPMQ9NSP4 180 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 GPR83Q9NYM4 423 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ANKMY1Q9P2S6 941 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ATXN10Q9UBB4 475 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 BLOC1S6Q9UL45 172 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 FOXJ3Q9UPW0 622 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 MGAT4BQ9UQ53 548 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 FKBP7Q9Y680 259 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 STYXL1Q9Y6J8 313 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 U3KQV3 271 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 ROCK2O75116 1388 aaKnown RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 INSRP06213 1382 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 DHX57Q6P158 1386 aaKnown RBP2.48□□□□□ -2.01
PTPRC-205ENST00000391970 PLEKHG2Q9H7P9 1386 aa2.48□□□□□ -2.01
PTPRC-205ENST00000391970 CACNA1FO60840 1977 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 GOLGA3Q08378 1498 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CASZ1Q86V15 1759 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 A0A0J9YVX5 310 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 A0A0U1RQV5 110 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 H3BTX0 84 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 E2F3O00716 465 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 IMPA2O14732 288 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ALOX15BO15296 676 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CHADO15335 359 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 GALR3O60755 368 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 E2F6O75461 281 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 SCGB2A1O75556 95 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 NUDT14O95848 222 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 IGSF6O95976 241 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 GOT2P00505 430 aaKnown RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 IGHV3-9P01782 118 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 IGHDP01880 384 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 SLC35G4P0C7Q5 338 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 RRASP10301 218 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 SHC1P29353 583 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 GTF2A1P52655 376 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 MFAP2P55001 183 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 MTTPP55157 894 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 RAG2P55895 527 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 RWDD2BP57060 319 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 POLR2FP61218 127 aaKnown RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 PPIAP62937 165 aaKnown RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 NOP14P78316 857 aaKnown RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 PRKCEQ02156 737 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 HSF2Q03933 536 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 SRYQ05066 204 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CCDC173Q0VFZ6 552 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ZP4Q12836 540 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 PDZK1IP1Q13113 114 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 SCGB2A2Q13296 93 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ADPRMQ3LIE5 342 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 C14orf28Q4W4Y0 310 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 NHLRC3Q5JS37 347 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms