RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CDK3Q00526 305 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 HHEXQ03014 270 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 DBPQ10586 325 aaPredicted RBP8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 ALG11Q2TAA5 492 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 DEFB133Q30KQ1 61 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 TP53I3Q53FA7 332 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 FAM111BQ6SJ93 734 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 NUP54Q7Z3B4 507 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 LRRC25Q8N386 305 aaPredicted RBP8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 OR2T33Q8NG76 320 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 RPLP0P6Q8NHW5 317 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 SETD6Q8TBK2 473 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 DTD2Q96FN9 168 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 NECTIN4Q96NY8 510 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 NIPSNAP1Q9BPW8 284 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 NTMT1Q9BV86 223 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 COMMD4Q9H0A8 199 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 ABCG5Q9H222 651 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 CLMPQ9H6B4 373 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 TRIM36Q9NQ86 728 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 STOML2Q9UJZ1 356 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 HCN2Q9UL51 889 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 RWDD3Q9Y3V2 267 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
SMARCA1-202ENST00000371122 TRAV27A0A087WT01 109 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 A0A1W2PQ72 361 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TVP23AA6NH52 213 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM189-UBE2V1I3L0A0 370 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 RBMXL2O75526 392 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SLITRK5O94991 958 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SRPRAP08240 638 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 THEGLP0DJG4 465 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 GSTM3P21266 225 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TM4SF4P48230 202 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 DAPP51397 102 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 MAT1AQ00266 395 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CTBSQ01459 385 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CHRNEQ04844 493 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CBLBQ13191 982 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 MAD2L1BPQ15013 274 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 UBE2UQ5VVX9 321 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC36A4Q6YBV0 504 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 B3GNT8Q7Z7M8 397 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC44A3Q8N4M1 653 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 BEST4Q8NFU0 473 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 ZNF420Q8TAQ5 688 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CDS1Q92903 461 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 ZNF775Q96BV0 537 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CRELD1Q96HD1 420 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM168Q9H0V1 697 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TUBA8Q9NY65 449 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 VNN3Q9NY84 501 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 WSB2Q9NYS7 404 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 ZNF69Q9UC07 566 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 MRTO4Q9UKD2 239 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC7A7Q9UM01 511 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CKAP5Q14008 2032 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 NUAK1O60285 661 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 NCR1O76036 304 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 PPP1R3DO95685 299 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 RAB36O95755 333 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 GSTM2P28161 218 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CA5AP35218 305 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 MGAT3Q09327 533 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 ALG10BQ5I7T1 473 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 FRMPD2BQ6IN97 320 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM126BQ8IUX1 230 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SAMD14Q8IZD0 417 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM156Q8N614 296 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 ADAMTS16Q8TE57 1224 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 GAB3Q8WWW8 586 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 FRMD6Q96NE9 622 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 INSM2Q96T92 566 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SNX11Q9Y5W9 270 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TRIP12Q14669 1992 aaPredicted RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 C13orf42A0A1B0GVH6 325 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 IRGMA1A4Y4 181 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 INMT-MINDY4F8WBC2 141 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 VEGFDO43915 354 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 UBXN7O94888 489 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 NDUFS1P28331 727 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 GJA4P35212 333 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 GDI2P50395 445 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 PRKXP51817 358 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 PPP3R1P63098 170 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 GPR19Q15760 415 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SLC14A2Q15849 920 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 DECR1Q16698 335 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 DUSP7Q16829 419 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 KLHL26Q53HC5 615 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 CPZQ66K79 652 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SYT14Q8NB59 555 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 SDR9C7Q8NEX9 313 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 FATE1Q969F0 183 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 NELL2Q99435 816 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 TMEM246Q9BRR3 403 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 NUFIP1Q9UHK0 495 aaKnown RBP8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 MAFFQ9ULX9 164 aa8.6□□□□□ -1.03
SMARCA1-202ENST00000371122 PPT2Q9UMR5 302 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms