RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 SLC38A4Q969I6 547 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 GPR78Q96P69 363 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 CMSS1Q9BQ75 279 aaKnown RBP9.44□□□□□ -0.9
SIN3A-201ENST00000360439 KCNH6Q9H252 994 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 GORASP2Q9H8Y8 452 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 GSN-AS1Q9NRJ2 163 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 PCTPQ9UKL6 214 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 PCDHA9Q9Y5H5 950 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 GPR45Q9Y5Y3 372 aa9.44□□□□□ -0.9
SIN3A-201ENST00000360439 NOBOXO60393 691 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 CREG1O75629 220 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 SEMA4FO95754 770 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 NSG1P42857 185 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 PSPHP78330 225 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 HYAL1Q12794 435 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 MLF2Q15773 248 aaPredicted RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 C1orf189Q5VU69 101 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 GPR139Q6DWJ6 353 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 TRIM40Q6P9F5 258 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 TGIF2LXQ8IUE1 241 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 OR4D6Q8NGJ1 314 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 SFT2D1Q8WV19 159 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 RTP3Q9BQQ7 232 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ZNF350Q9GZX5 532 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 MFFQ9GZY8 342 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 SNTG1Q9NSN8 517 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 KCNK6Q9Y257 313 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 RNF11Q9Y3C5 154 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 PCDHGB5Q9Y5G0 923 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 A0A087X0M5 115 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 A0A1B0GX30 115 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 B4GALT3O60512 393 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 G6PDP11413 515 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 HSPA7P48741 367 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 TFF2Q03403 129 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ODF4Q2M2E3 257 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 LEXMQ3ZCV2 418 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 RPS27LQ71UM5 84 aaKnown RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ZZZ3Q8IYH5 903 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 NLGN4XQ8N0W4 816 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.43□□□□□ -0.92e-7■■■■■ 64.2
SIN3A-201ENST00000360439 TM9SF4Q92544 642 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 TMEM74Q96NL1 305 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 NTMT1Q9BV86 223 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 SRMSQ9H3Y6 488 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 FZD3Q9NPG1 666 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 DUSP22Q9NRW4 184 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 MROH6A6NGR9 719 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 LINC01387J3KSC0 135 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 NPC1O15118 1278 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 TCF21O43680 179 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ANXA3P12429 323 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ANXA7P20073 488 aaKnown RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 PRPS1L1P21108 318 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 GABRB3P28472 473 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 OXTRP30559 389 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 RIDAP52758 137 aaKnown RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 PLA2G16P53816 162 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 DIO3P55073 304 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 C1orf61Q13536 156 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 PCBP2Q15366 365 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■□□ 18.5
SIN3A-201ENST00000360439 XKR6Q5GH73 641 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 TMEM108Q6UXF1 575 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 OR4F6Q8NGB9 312 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 RHOXF1Q8NHV9 184 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ZDHHC1Q8WTX9 485 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 EEF1AKMT1Q8WVE0 214 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 LGALS12Q96DT0 336 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ATG10Q9H0Y0 220 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 OARD1Q9Y530 152 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 CFAP20Q9Y6A4 193 aaKnown RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 OAS3Q9Y6K5 1087 aaKnown RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 hCG_1807616A0A1W2PRN6 198 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 LRIT2A6NDA9 550 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 MAGEB17A8MXT2 336 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 HSBP1L1C9JCN9 74 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 MANBAO00462 879 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 CDRT1O95170 752 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ITGAMP11215 1152 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ZNF30P17039 623 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ITPKAP23677 461 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 GRK5P34947 590 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 DDOSTP39656 456 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ARF3P61204 181 aaPredicted RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ARF1P84077 181 aaKnown RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 ATOH1Q92858 354 aaPredicted RBP9.43□□□□□ -0.9
SIN3A-201ENST00000360439 SCAMP4Q969E2 229 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 MYADMQ96S97 322 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 TBC1D17Q9HA65 648 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 NLKQ9UBE8 527 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 IL17BQ9UHF5 180 aa9.43□□□□□ -0.9
SIN3A-201ENST00000360439 IGLON5A6NGN9 336 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 CASC3O15234 703 aaKnown RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 APBB3O95704 486 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 IGFBP1P08833 259 aaPredicted RBP9.42□□□□□ -0.9
SIN3A-201ENST00000360439 SLC6A4P31645 630 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 RYKP34925 604 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 PHF19Q5T6S3 580 aa9.42□□□□□ -0.9
SIN3A-201ENST00000360439 OTUD1Q5VV17 481 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms