RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 MTG2Q9H4K7 406 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 FARSAQ9Y285 508 aaKnown RBP11.15□□□□□ -0.62
COL9A1-202ENST00000357250 A6NHS1 94 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 H7C417 338 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 RPL6Q02878 288 aaKnown RBP11.15□□□□□ -0.63
COL9A1-202ENST00000357250 NTRK2Q16620 822 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 TMEM205Q6UW68 189 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 TAS1R1Q7RTX1 841 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 VTCN1Q7Z7D3 282 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 OR6C4Q8NGE1 309 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 NETO1Q8TDF5 533 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 ADAMTS19Q8TE59 1207 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 GATA6Q92908 595 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 DMRT3Q9NQL9 472 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 GDE1Q9NZC3 331 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 ANKMY1Q9P2S6 941 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 OR1A2Q9Y585 309 aa11.15□□□□□ -0.63
COL9A1-202ENST00000357250 TRAV6A0A075B6T7 132 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 S100A2P29034 98 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 SLC39A5Q6ZMH5 540 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 TMEM25Q86YD3 366 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 SLC7A13Q8TCU3 470 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 TANKQ92844 425 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 GAL3ST3Q96A11 431 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 ATG5Q9H1Y0 275 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 KCNK13Q9HB14 408 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 PLD2O14939 933 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 TPD52L2O43399 206 aaKnown RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 SDC1P18827 310 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 GNMTQ14749 295 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 PAGE3Q5JUK9 113 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 HOXB13Q92826 284 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 CACNG6Q9BXT2 260 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 SLC5A7Q9GZV3 580 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 SYT4Q9H2B2 425 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 TMPRSS11EQ9UL52 423 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 GABBR2O75899 941 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 MMP2P08253 660 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 UBL4AP11441 157 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 CST5P28325 142 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 GGT2P36268 569 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 SLC7A9P82251 487 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 AIMP2Q13155 320 aaKnown RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 PKDCCQ504Y2 493 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF648Q5T619 568 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 KCTD9Q7L273 389 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 ZER1Q7Z7L7 766 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 CHDHQ8NE62 594 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 ATOH8Q96SQ7 321 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 NMNAT1Q9HAN9 279 aaPredicted RBP11.14□□□□□ -0.63
COL9A1-202ENST00000357250 IL21RQ9HBE5 538 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 GJD2Q9UKL4 321 aa11.14□□□□□ -0.63
COL9A1-202ENST00000357250 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 FMO6PO60774 539 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 HRGP04196 525 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 HNRNPA2B1P22626 353 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 HTR2AP28223 471 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 NAA10P41227 235 aaPredicted RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 NTHL1P78549 312 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 HNRNPA1L2Q32P51 320 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 CYP27C1Q4G0S4 372 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 HACD4Q5VWC8 232 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 DCP2Q8IU60 420 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 CCDC28AQ8IWP9 274 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 NAGSQ8N159 534 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 SLC39A11Q8N1S5 342 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 SYNPOQ8N3V7 929 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ABHD11Q8NFV4 315 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 GATAD2BQ8WXI9 593 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 LDAHQ9H6V9 325 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 INPP5EQ9NRR6 644 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 FAIMQ9NVQ4 179 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 GPR83Q9NYM4 423 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 RIMS3Q9UJD0 308 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 AGAP5A6NIR3 686 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 NOTOA8MTQ0 251 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 C11orf98E9PRG8 122 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 RTCAO00442 366 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 SCGB1D2O95969 90 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 PRLP01236 227 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 MLLT10P55197 1068 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 RAB40BQ12829 278 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 GGTA1PQ4G0N0 100 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 PLAG1Q6DJT9 500 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ZNF551Q7Z340 670 aaPredicted RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 MR1Q95460 341 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 NECAB3Q96P71 396 aaPredicted RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 SLC30A3Q99726 388 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 C7orf50Q9BRJ6 194 aaKnown RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ENY2Q9NPA8 101 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 KLHL9Q9P2J3 617 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 EBF1Q9UH73 591 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 CYP8B1Q9UNU6 501 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 NPIPB15A6NHN6 443 aaPredicted RBP11.13□□□□□ -0.63
COL9A1-202ENST00000357250 M0R129 80 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 ADAM12O43184 909 aa11.13□□□□□ -0.63
COL9A1-202ENST00000357250 PRAF2O60831 178 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms